FMO14274.5prime Sequence
819 bp (662 high quality bases) assembled on 2014-07-25
> FMO14274.5prime
TCAGTCGACATGGGTAAAGATCGACTGCCCGAGCTTTTGCAGCGCTCATT
GAGCACGAACTCGTCGAACTCGTCGTCGAACGGTTCACTGCTTTTGAACG
TGTACAGTGGAACCACGGAGTTCATCATTGGCAACACCGGCGGTAACAAT
AATAGCTACAGTGTCGTTAGCCAAAACTCTCACAGCTGCAGCAACAATAA
CAGCAGCACCGAACCCAAGGATCGGTCCAGTTCAAAGATGACGCAGTATG
GCTCGAATGTGGATGACATACTCAATCCGTACACGGAGATTCGCCAACAA
CTCGCACAGATAGCCGCCAACTTGGAGACGATGAACCGCATGGCCCAAAC
TGTCAATCTGCGAACTTTCAACGAGAACGAGATGGATGAGCTTCACAACA
AAAACCTGAGGCTGGGCAATCAGCTAATGACGCGATTCAACGACTTCAAG
GCGAATCTGCCGGCGGAAAACGATTACAGCTTGAGGCAAGGATGAAAAGA
ACCCTTTTCTATGGACTCCACCAGACTTTCATCAATCTGTGGCACAAAAC
GAACTATTCCTGCAGAACTACGAGACCAAGTTCAAAAAGAATCTGAGACT
GCATACAAAATCATTAATTCTTGAAGCCAGCGACAGAATCGAGTTACTCA
TCGAGAACAAGACAACAACTCTTTGTGGATATTTTCTGCAGAAACGAAAA
GGACGGCAGACCCTGCCGAAATGATGATCGATCACGAGCTGCGCCGGCTG
AGAAAGTCATCGAGGAGTGCACGCCTGTTCATGCCATCCGGACCCTGTTA
TGGAGTAGCGAGGTGATCC
FMO14274.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx4-RA | 1667 | CG2715-RA | 594..1425 | 10..819 | 3450 | 96.2 | Plus |
| Syx4-RB | 1083 | CG2715-RB | 43..841 | 43..819 | 3285 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2742561..2742800 | 279..40 | 1200 | 100 | Minus |
| X | 23542271 | X | 2741593..2741832 | 610..373 | 1085 | 98.8 | Minus |
| X | 23542271 | X | 2741898..2741992 | 373..279 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:31:22 has no hits.
FMO14274.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:21 Download gff for
FMO14274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx4-RA | 591..1425 | 7..819 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:12 Download gff for
FMO14274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx4-RA | 591..1425 | 7..819 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:12 Download gff for
FMO14274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2741589..2741831 | 374..613 | 98 | <- | Minus |
| X | 2741898..2741991 | 280..373 | 100 | <- | Minus |
| X | 2742561..2742797 | 43..279 | 100 | <- | Minus |
| X | 2743451..2743486 | 7..42 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:21 Download gff for
FMO14274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2635622..2635864 | 374..613 | 98 | <- | Minus |
| arm_X | 2635931..2636024 | 280..373 | 100 | <- | Minus |
| arm_X | 2636594..2636830 | 43..279 | 100 | <- | Minus |
| arm_X | 2637484..2637519 | 7..42 | 97 | | Minus |
