FMO14277.5prime Sequence
384 bp (384 high quality bases) assembled on 2014-07-25
> FMO14277.5prime
TCAGTCGACATGGCACACACTGGCGGGAACCTATCCGGTAACATGCAGCC
GCCACCGCCTTCCGGAGGCAGGTTCTCCGTGGACATGCAAAGCCTGCCCT
CGCTATCCAACCTGCCATCACCGCTGCAGATCTTCCAAATGGTCCGAAAC
TCCCTGCGGCCCTGGGTAGTCTTCTTCAACATCAACAATTTCAAAACGGC
CATCAGCATGCAGCGGCTAAATAGCCGGGTTATTCGGAATCTCTCCTATT
TTCAGGCCAACTACGTTTTCATCTTTTTTGTACTGATGATATACTGCCTT
TATAATCTTAAGCATCACGGCTCCCTGCATTCTGCTGGTCATCCTGGCTT
CCGCTTTTGGCTGCCAGCAAGCTTTCTAGACCAT
FMO14277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1418-RA | 1128 | CG1418-RA | 352..695 | 10..366 | 1580 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9964375..9964583 | 299..91 | 1045 | 100 | Minus |
| 2R | 25286936 | 2R | 9964634..9964716 | 92..10 | 415 | 100 | Minus |
| 2R | 25286936 | 2R | 9964268..9964334 | 366..300 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:31:33 has no hits.
FMO14277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:26 Download gff for
FMO14277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1418-RB | 343..714 | 1..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:19 Download gff for
FMO14277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1418-RA | 343..701 | 1..373 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:19 Download gff for
FMO14277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9964634..9964722 | 1..92 | 94 | | Minus |
| 2R | 9964262..9964334 | 300..373 | 97 | <- | Minus |
| 2R | 9964375..9964581 | 93..299 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:26 Download gff for
FMO14277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5852139..5852227 | 1..92 | 94 | | Minus |
| arm_2R | 5851767..5851839 | 300..373 | 97 | <- | Minus |
| arm_2R | 5851880..5852086 | 93..299 | 100 | <- | Minus |
