FMO14282.5prime Sequence
678 bp (678 high quality bases) assembled on 2014-07-25
> FMO14282.5prime
TCAGTCGACATGCTAAGGTTGTGCCTTCCAACTCGAGCTGGATATGTGCG
TAATTTCTCGAACGACAAACCAAGAAAACCCGAAACACACTATGAAGTTT
TGAATATTCGCAATGATTGCAGCACCCGTGAAGTCCGTAATGCCTTTGTC
CAGCTCTCCAAATTGTACCACCCAGATGTTAAGAGCAATGCTGCGTGTCC
GGAGCGCACAGCCCGATTTGTTCAGATCTCCGAGGCGTACAAGACCCTGA
TAAAGCCGGAGCGGAGGAGAGACTACGATGACAGCCTGCTGTGGCAGCCA
TCGCGCTCGGACCGCAGTCCCGTTGGCGAGACGGTCAATCCCGGCCAGGC
GTGGGATGTGAGGCCCAACTACGATCCCAATCCAGGACCGTACTATGGCA
TCCGTGGTCTGAAGAGGGTCTCCAACTGGCAGGTGGCCGTGGTTCTGATG
GCCCTAGGCTTCGTCGGGGCACTCTTTGGCTTCACCTCCGTCAGGTCGTC
CTTTAAACTGAGTCGCCAGATCCAGGACGAAAATCTCAGCAGAGGCTAAT
TCCCATCATGCCGCCGTTGTGGCCGATGCCCAGAAGTACGGCAACGAGGA
GCAAGTGCGTCGTATGGTGGACCGTATGTCGCGGAGTCCTTTCAACCAGT
CTTCGGCTAAGCAAGCTTTCTAGACCAT
FMO14282.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DnaJ-60-RC | 1472 | CG42567-RC | 125..775 | 10..661 | 3235 | 99.8 | Plus |
| DnaJ-60-RA | 822 | CG42567-RA | 125..775 | 10..661 | 3235 | 99.8 | Plus |
| CG42568-RB | 1472 | CG42568-RB | 125..775 | 10..661 | 3235 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24158590..24158921 | 496..165 | 1660 | 100 | Minus |
| 2R | 25286936 | 2R | 24158365..24158533 | 661..492 | 800 | 99.4 | Minus |
| 2R | 25286936 | 2R | 24158974..24159092 | 165..47 | 565 | 98.3 | Minus |
| 2R | 25286936 | 2R | 24159145..24159188 | 53..10 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:31:08 has no hits.
FMO14282.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:13 Download gff for
FMO14282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42568-RB | 120..778 | 1..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:03 Download gff for
FMO14282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42568-RB | 120..778 | 1..664 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:03 Download gff for
FMO14282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24158362..24158530 | 495..664 | 98 | <- | Minus |
| 2R | 24158592..24158920 | 166..494 | 100 | <- | Minus |
| 2R | 24158974..24159085 | 54..165 | 100 | <- | Minus |
| 2R | 24159145..24159193 | 1..53 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:13 Download gff for
FMO14282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20045885..20046053 | 495..664 | 98 | <- | Minus |
| arm_2R | 20046115..20046443 | 166..494 | 100 | <- | Minus |
| arm_2R | 20046497..20046608 | 54..165 | 100 | <- | Minus |
| arm_2R | 20046668..20046716 | 1..53 | 92 | | Minus |
