FMO14283.5prime Sequence
417 bp (417 high quality bases) assembled on 2014-07-25
> FMO14283.5prime
TCAGTCGACATGGGATTTATTATAAATTTTAATTTATTTTGCGTTCTACT
GCTAGTTGACTTTGGACAACCAGAATATGCAGAATATTTCAATCCAGAAG
AGCCCTTAGATGATCACCTAACACGGCCAGATGAGGATGTGGCAAGTAGT
GATAATGAGATGACAATGTCGTATGATTATCACAATGAAAACCATGACAG
TACTAACCACCCAGGTCCTCAAGAAGATGCTACAACTGATAATTATGTCG
AATCGTACGTTGATCATTATACCACTGGAATGGATAATCTTGAAGAAAAT
CAGCAAGACACAGATTACGGTCAGTATGAGCCACACGTTGAACATGAAAT
TGAAGATCGGATAGTGCGATATGCGATGCATAAGTGGCGCGAAGAAATTG
CAAGCTTTCTAGACCAT
FMO14283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43083-RA | 430 | CG43083-RA | 4..395 | 8..399 | 1960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15648681..15648918 | 58..295 | 1190 | 100 | Plus |
| 3L | 28110227 | 3L | 15648985..15649090 | 294..399 | 530 | 100 | Plus |
| 3L | 28110227 | 3L | 15648574..15648624 | 8..58 | 255 | 100 | Plus |
Blast to na_te.dros performed 2014-11-29 00:31:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 521..548 | 46..19 | 104 | 85.7 | Minus |
FMO14283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:14 Download gff for
FMO14283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43083-RA | 2..401 | 7..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:05 Download gff for
FMO14283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43083-RA | 2..401 | 7..407 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:05 Download gff for
FMO14283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15648568..15648624 | 3..58 | 94 | -> | Plus |
| 3L | 15648682..15648918 | 59..295 | 100 | -> | Plus |
| 3L | 15648987..15649096 | 296..407 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:14 Download gff for
FMO14283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15641668..15641724 | 3..58 | 94 | -> | Plus |
| arm_3L | 15641782..15642018 | 59..295 | 100 | -> | Plus |
| arm_3L | 15642087..15642196 | 296..407 | 96 | | Plus |
