FMO14286.5prime Sequence
853 bp (853 high quality bases) assembled on 2014-07-25
> FMO14286.5prime
TCAGTCGACATGCGAGACCATCTAATGCTCATTGAAATTTACGATTATGC
TGCGAAATTATTAAACAATATGACCGCCAGAGGAGTCAGGAATTCAGTGG
GAAAATCAGCCGAGAGCCGTACTAAGGAATCAACAGGGAAATTGGGCAGC
CTGCTTGGCCGCACACTGGCCAAAGTGGCCAAAGTGGCCCGCTCCAATCC
CGCCCAGCACGTGACCAATCTGCCCGTTTCCGCACTCCTGCTCCAGGCCC
TCGACGTGGCGGACGTGGCCCGCGGACAGGGAATCGATTATCCCATCACT
AGCACCACCGGGACCACCTTCAACATTATCACCACCACCACCACCACCAC
CACCACCACCACGGGCAGTGACCCAACGGATGTGCTCGGCAGTCAGCCGC
CGGCGTTCTCATTTCCCGCCAACGTCACTGGAGCACCGGGAAGTGCGGGG
AATGCGAACGCATACCTGCCCGCGGGCAATCTCAGCGGTTTCATCGAATC
CTCAACAACGGCGGTGATGAGCACACTGCCCATACCCACCAGCACCATGG
CCACGCTCCAGGCCCAAACGGTGGCCACTTTCATCGCCGCCACCGGCAGC
AAGAATCGCCCAACGACCATCGTTGTCTACCCAACGGTTTCACCCGAATC
GATTGTCATCCCGATCGTCTCCTGTATCTTCGGCTTCCCCATCCTGGCGC
TTCTGGTGATCTGTTGCCTTCGAAGGAGGGCCAAGTTGGCCAGGAGAGGG
ATAGGAGGCGTAACTACGATATGCAGGACCATGCCGTCAGCCTGATTACC
GATCGTCGCGAGCTATCAGTCTACGTCCTGACGAGCGCAGCTTTCTAGAC
CAT
FMO14286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:32:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43740-RB | 1850 | CG43740-RB | 119..941 | 10..831 | 4090 | 99.9 | Plus |
| CG43740-RC | 1878 | CG43740-RC | 119..904 | 10..794 | 3905 | 99.9 | Plus |
| CG43740-RA | 1878 | CG43740-RA | 119..904 | 10..794 | 3905 | 99.9 | Plus |
| CG43740-RC | 1878 | CG43740-RC | 933..969 | 795..831 | 185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10335824..10336451 | 10..637 | 3140 | 100 | Plus |
| X | 23542271 | X | 10343870..10344028 | 637..794 | 745 | 99.4 | Plus |
| X | 23542271 | X | 10346848..10346885 | 794..831 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:31:59 has no hits.
FMO14286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:37 Download gff for
FMO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43740-RB | 112..948 | 1..841 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:32 Download gff for
FMO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43740-RB | 112..948 | 1..841 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:32 Download gff for
FMO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10335817..10336451 | 1..637 | 99 | -> | Plus |
| X | 10343871..10344028 | 638..794 | 99 | -> | Plus |
| X | 10346849..10346892 | 795..841 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:37 Download gff for
FMO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10229850..10230484 | 1..637 | 99 | -> | Plus |
| arm_X | 10237904..10238061 | 638..794 | 99 | -> | Plus |
| arm_X | 10240882..10240925 | 795..841 | 91 | | Plus |
