FMO14289.5prime Sequence
1009 bp (889 high quality bases) assembled on 2014-07-25
> FMO14289.5prime
TCAGTCGACATGCCTTCCAGCTGCTCTTTTGAGCTCGATCGCCGCGAACC
CATTTACTACAGTGGTGAGACGGTCAATGGAAGGGCCATTCTGACAACAA
CATCCGAAAAGTCTGTGAACGAGGTATACATTCTTTTCGAGGGCGAGGCA
AAGGTGCGATGGGATGAGCGGCGAACAAGGACGAGAGGTGGAAAGACCGA
GCACTACACGGAGTATTTCCGAGGCAAGCAGCAGTACTTGTACACCCGGA
CATCGGTCTTTGGATCCGGGAATCTGCCGCCAGGTACGCACACCTACAAC
TTCTGCATTCCACTGCCCCTGGAATGCCCCTCATCAGTGGTGGCCCAGTA
CGGAAAAATCTTCTACGAGGTCTCCGTGGTCATCGATCGCCAGTGGCGCT
TCAACAACGTCTTCAAGCAGCCACTGACGGTCATACAGACCTACAACCTC
AACATGAGCCCCCAATTGCTGATGCCCCTAGTCCGAGAGGACATCAAGCA
CTTTTGCTGTTGGCCCTGCAGTTCAGGCCCGGTTCTATCGACATTAACAA
TACCCTTCGGTGGTTACGCGCCTGGTCAGAAGATACGCTTTACTCTGGAG
ATTGACAACCAGTCGAGTGGCTATGATCTGAATGGGATCGAACTGAAACT
TAAGCAGATTTACAAATTCCAGGCTCAAACGCCGCACCACAAACTCGCGA
AAAGGAGCACAGCCTCAACAAAGTTGCCAGCAGAGCGCGTTTTGAGGCTC
TCAAAGAAAAAAATTGAAAGGAACCCTGGCTATTCCAGCAGTACCGCCCT
CTTCCCGCACCGAAGCATCATTTCGTAGTTACCAAGTTATCTCACGATCA
GCACTGCGACTGCACGTGACTCGGACTTGAGTGCGATGTATGCACATACA
TGATCAAGTGCGAGATCAGCAGTGCAGCCAGTGATACCGAACGCGAACCT
CCTGCGGACGGCGCGATCTGCCTCAGTATGACATGCAGGCCACACTCCAG
AGGCCAACT
FMO14289.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:32:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2641-RA | 1510 | CG2641-RA | 141..1018 | 10..878 | 4130 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:32:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7794869..7795219 | 121..471 | 1755 | 100 | Plus |
| 3R | 32079331 | 3R | 7795592..7795983 | 471..856 | 1600 | 98 | Plus |
| 3R | 32079331 | 3R | 7794209..7794320 | 10..121 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:32:08 has no hits.
FMO14289.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:40 Download gff for
FMO14289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2641-RA | 141..1034 | 10..890 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:38 Download gff for
FMO14289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2641-RA | 141..1034 | 10..890 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:38 Download gff for
FMO14289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7794209..7794320 | 10..121 | 100 | -> | Plus |
| 3R | 7794870..7795219 | 122..471 | 100 | -> | Plus |
| 3R | 7795593..7795983 | 472..856 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:40 Download gff for
FMO14289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3620592..3620941 | 122..471 | 100 | -> | Plus |
| arm_3R | 3621315..3621705 | 472..856 | 97 | == | Plus |
| arm_3R | 3619931..3620042 | 10..121 | 100 | -> | Plus |
