FMO14291.5prime Sequence
965 bp (814 high quality bases) assembled on 2014-07-25
> FMO14291.5prime
TCAGTCGACATGCCCAGGGAACCAGCTAGTGTCTATGGGGAAAAGGCAGA
GAAGGTGAAAACGTACCAACCTGGCACAGTGGTAGTCCAGCCACCCGAAC
GACGGCCTCCCGAGCCGGAACACGATCGCCTGATGTTCATTCCCGACCTA
GACCAGGACATTACCCATCGGGATGTGTTCACCTATTTCAGCAAATTTGG
GGATTTGGAGAGGGTCAGCGTGAGGAATGGCATGAGTAACTTTAACTACG
CCATGGTGCGGTTTAGTCGCACTTCATACATGGAGCATGCCATCGAATCG
AATCCACATCTGATCAAGGGATACCGATTGAACTGTCGCAAGGCGAAAGA
AAAAAGTACAAATAAGGGAAGTCAGCAAAACTCTGGGACCATAAAAAAAC
CAAAGGCAACGATAACGCAGCCACACAAAGCTCCTGTAAGGCAGGCAGAG
AAAAACGACGCCAAACAAAGTGGTCACAAATCTTTAGAGAAGAATTCGAA
GCCACCAATTAACAGATCATTGCTTCTTCAAAAACTGGTAGAACCCACGT
CCTATAGTCCATTTACCGCCGTAAAATCTGATCGAAACTATGCCTATGCA
TTAACCAATGACATTGGAATCTCCCGCTGGAGCTTTAACTTGTTGAAATT
CGAACCCAGTTCAGACGAGTGAGGGCCCTGGAAAAGGGTCTTTCCAGTTC
GGCAAAGCTCCTACTGAGCATACGGAAGAAACTGGCTGCCGTGCCCACAA
GTCTGTCGAGCCACCAGCTCCAAAGTGCACAAACTCCTAGTGATAAAGCG
TTCAAAGTACTCTTAGATAGCTCACATCTGCTCTAGTCAGTGCTCCATCC
TGCACAAACTCTAGTGATAAGCGTCAAAGTATTTTTTAAAATACTTCACC
CAACCTTCTGCCTCTAGTCAAGTGTTCCTATCCTTGGCGAAACTCTTGGC
CGATAACTTCCTAAT
FMO14291.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:32:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14506-RC | 1356 | CG14506-RC | 86..1041 | 9..940 | 4035 | 96.2 | Plus |
| CG14506-RB | 3302 | CG14506-RB | 146..1062 | 48..940 | 3840 | 96.1 | Plus |
| CG14506-RB | 3302 | CG14506-RB | 86..126 | 9..49 | 205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29296219..29296974 | 799..48 | 3615 | 99.5 | Minus |
| 3R | 32079331 | 3R | 29297055..29297095 | 49..9 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:32:14 has no hits.
FMO14291.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:44 Download gff for
FMO14291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14506-RC | 83..880 | 3..799 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:41 Download gff for
FMO14291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14506-RC | 83..880 | 3..799 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:41 Download gff for
FMO14291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29296219..29296972 | 50..799 | 99 | <- | Minus |
| 3R | 29297055..29297098 | 3..49 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:44 Download gff for
FMO14291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25121941..25122694 | 50..799 | 99 | <- | Minus |
| arm_3R | 25122777..25122820 | 3..49 | 93 | | Minus |
