FMO14294.5prime Sequence
888 bp (888 high quality bases) assembled on 2014-07-25
> FMO14294.5prime
TCAGTCGACATGCGGCACTTACAATTAATGAAATATGTAAACCCACGGTT
TGCAATCAACACGGTTATTACCCAACGCTTAATGTCAAAGTCTGATGGAA
AATCTTCTGGCACAGGATCAAAAGACGCGAAGTGTAAAGGTACTAAAGAT
GCAAAATCTTCAAATGCAGCAAAGAAATCTACTGAAGCAAAGGCCAAGGC
TTCCGATGCGGCAAAGAAAGCGACACCGCCTAAAGCGGCCAAGGAAACTA
AAGTTACGCCGCCAAAGGACGAAACAGCCATAGCCGGAGGATCAAAATGC
CCGCCAAAAGTCCAACCTGTTGCAGAAACTAGTAAAAATAAAAAGAAACT
ACAATCGTGTGATGAATTGCTACTAGGTAAAAGTACTCGAAAGCAGAAGA
AACCTCTAACAGCGATCCAAGGAGGGGACCTTGGCTGTCCTGGCCGGACT
GGAAAGAAACCACAAATTGTTGCACAACACTCCAAGCTCTGGCAGAAAAT
CTCGCTCTTCGGAGTCCTGCCGATGATAGCCATTCTCACCCTTTTGGTTT
TTAGCACTCGATCGGAAGAGGAGCGTCTTGAGTTTAAGAACTATGAGCAT
ATGTACCGGCGGACGAAGCGATACTGGTTTAAGGATGGAAACCGTACCGC
TTTTCACAATAGTCACTTTAATGCTTTGCCTCCAGCCGGATATGAGGACG
AAGTGGACGAGAGTGGGATTGGACAGGATCCGGAGACGGACAAGGACAAG
AAGGCTCGAATGAAAGAATTCGACAAGGTCGTCAAGAATTGGCGCAACAC
TCGTCTAAAAGGATGCGCAGCTCAAAAAGGAGCAGCCGCTGCTGAAAAAG
AGCTAGAAAACAAGAAGCACAGCAGCTTTCTAGACCAT
FMO14294.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14077-RB | 3077 | CG14077-RB | 81..946 | 10..871 | 4230 | 99.5 | Plus |
| CG14077-RC | 1009 | CG14077-RC | 81..946 | 10..871 | 4230 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18913037..18913448 | 871..464 | 1860 | 99 | Minus |
| 3L | 28110227 | 3L | 18913500..18913744 | 463..219 | 1225 | 100 | Minus |
| 3L | 28110227 | 3L | 18913956..18914070 | 124..10 | 575 | 100 | Minus |
| 3L | 28110227 | 3L | 18913806..18913903 | 220..123 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:31:49 has no hits.
FMO14294.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:33 Download gff for
FMO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14077-RC | 81..946 | 10..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:28 Download gff for
FMO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14077-RC | 81..946 | 10..871 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:28 Download gff for
FMO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18913030..18913448 | 464..874 | 98 | <- | Minus |
| 3L | 18913500..18913742 | 221..463 | 100 | <- | Minus |
| 3L | 18913806..18913901 | 125..220 | 100 | <- | Minus |
| 3L | 18913956..18914070 | 10..124 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:33 Download gff for
FMO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18906130..18906548 | 464..874 | 98 | <- | Minus |
| arm_3L | 18906600..18906842 | 221..463 | 100 | <- | Minus |
| arm_3L | 18906906..18907001 | 125..220 | 100 | <- | Minus |
| arm_3L | 18907056..18907170 | 10..124 | 100 | | Minus |
