FMO14295.5prime Sequence
651 bp (651 high quality bases) assembled on 2014-07-25
> FMO14295.5prime
TCAGTCGACATGTACTCCCATTTCTTAACAGAGAAAAAGCGTCGCATATA
CGATGAGTATGGCAAAGATGGACTGGGCGATCGTGGCCAGAGTCGCTCGC
ATGCCCGCCACCATTATAGCACACACGATTTCGATGACTTCGATATTTTG
GGCGGCTTTCAGTTTGCATTCCGCCCGCCCGAGGAAGTGTTCCGTGAGTT
CTTCGGCATCCACTCGCCCTTCGCCGACTTATTCCGAGATGCCAATGGAC
ATTCGAATGGCAGCACAAGCGGCTCGAGTGGCAGTCGACGCAATGGCGGC
AGCAGTGGATCATCTCGCCACCATCATCATCACCACCAGCACAAAGTGGC
CAGTCCGTTCGGGGCTCCAATGCTTAACTACTCAATGATGGACTTCTTTA
TGCCCACCAGCGGCTTCACCTCGTTCTCGTCGATGACCCACGGCAATGGC
AGCAGCGGTGTCACCCACATCTCCAGCGGACCCGGTGCCAGTGTCAAGCG
CACCTCCACTTCGACGGTGTTTGTGAATGGCAAGAAACTGATGACCAAAC
GGGTCGTCGAAAACGGCAAGGAAACTGTCTTTTCATATGAAAATGATGTT
CTGAAATCAAAGACTGTGATGGGCTCCCTTCAAGCAAGCTTTCTAGACCA
T
FMO14295.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mrj-RF | 2112 | CG8448-RF | 517..1141 | 9..633 | 3125 | 100 | Plus |
| mrj-RG | 2499 | CG8448-RG | 926..1528 | 31..633 | 3015 | 100 | Plus |
| mrj-RH | 2274 | CG8448-RH | 701..1303 | 31..633 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16204441..16204756 | 552..237 | 1580 | 100 | Minus |
| 2R | 25286936 | 2R | 16204825..16205054 | 238..9 | 1150 | 100 | Minus |
| 2R | 25286936 | 2R | 16204300..16204382 | 633..551 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:31:52 has no hits.
FMO14295.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:35 Download gff for
FMO14295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mrj-RF | 517..1146 | 9..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:29 Download gff for
FMO14295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mrj-RF | 517..1146 | 9..640 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:29 Download gff for
FMO14295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16204442..16204754 | 239..551 | 100 | <- | Minus |
| 2R | 16204825..16205054 | 9..238 | 100 | | Minus |
| 2R | 16204295..16204381 | 552..640 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:35 Download gff for
FMO14295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12091947..12092259 | 239..551 | 100 | <- | Minus |
| arm_2R | 12091800..12091886 | 552..640 | 96 | <- | Minus |
| arm_2R | 12092330..12092559 | 9..238 | 100 | | Minus |
