FMO14296.5prime Sequence
987 bp (867 high quality bases) assembled on 2014-07-25
> FMO14296.5prime
TCAGTCGACATGTTGTGCGAAGGAGTGATGCTGCCCCACAGCTTGGGCGT
GGGCGGTGGGTTTGTTGCTACCATTTATTCCAGAGAAACAGAATTTAGTG
AGGTTCTAATTGCCCGAGAAACCGCTCCAGCTGCGGCCACTCAGGACATG
TTCGTCAAAACAGAAATCACCGGCGCATTATCCTGTGCCGTTCCCGCCGA
AATTTATGGCTACTCCGAGTTGCACGATAAGTATGGCCGCCTGCCCTGGA
AAACGCTTTTCCAGCCCACAATTGATCTCTGCCGCCGTGGCATCCTGGTC
TCCAGGTATCTCTCCGGAGTCCTTCAACGCGAAGAAGAGCGTATCAGAAA
CGAACCCTCCATGGCCGAGATCTTTATTAATCCGAAAACGGATGAGGTCT
ATAAGCAGGGCGAGGTCATGTACCGTCACACTTTGGCCGAAACTCTGGAA
ATCATATCTGATGAGGGCGCCAAAGCTATTTATGGAGGGGGCAGGGTAGG
CAGAAAACTGGTGGAGGATATCCAGGCAATGGGCGGCATTGTTACCGAAG
AGGATCTGCAAAGTTACAATGTTCGATGGGAAATGCCGCTCCACTCCCAC
TTTAGTGGTGGCTACAAATTAATCACCTCGACACTGCCCACGAGTGGGGC
CGTGTTAACCTTTATGCTGAATGTAATGGAACCGCTATATACGAGCAATA
CGGACAAGTACTGGCAGCGGTTAATTGAGACTTTTAGCACGCATACGGCA
TCGTACCAATTTGGGCGACATCACTATGACAGATGTGCAGAGATGTACGA
AACTTATCGATCGCTTTGCGCAGAGATCGAAACTATTAGACGACAGACTC
GAGACATGTCGTACTACGAGCATTTGCTATGAGGAGGATCATGGTACAGC
ACCACATATCGTTGGCGCCAATGGTGATGGCCATTTCATGGACAGTACAA
TTAACAGGCATTTGGAGCAATGGAGATTCCGGCAACA
FMO14296.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:26:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17636-RA | 1894 | CG17636-RA | 294..1302 | 9..985 | 4120 | 95.7 | Plus |
| CG17636-RC | 2028 | CG17636-RC | 428..1436 | 9..985 | 4120 | 95.7 | Plus |
| CG17636-RB | 2036 | CG17636-RB | 436..1444 | 9..985 | 4120 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 125495..126055 | 569..9 | 2790 | 99.8 | Minus |
| X | 23542271 | X | 125171..125409 | 802..570 | 930 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:26:54 has no hits.
FMO14296.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:13 Download gff for
FMO14296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17636-RB | 429..1398 | 1..943 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:04:48 Download gff for
FMO14296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17636-RB | 429..1398 | 1..943 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:48 Download gff for
FMO14296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 125008..125409 | 570..943 | 91 | <- | Minus |
| X | 125495..126062 | 1..569 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:13 Download gff for
FMO14296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21395..21796 | 570..943 | 91 | <- | Minus |
| arm_X | 21882..22449 | 1..569 | 99 | | Minus |
