FMO14301.5prime Sequence
1037 bp (916 high quality bases) assembled on 2015-04-08
> FMO14301.5prime
TCAGTCGACATGGAGTCGCGCCTGGCTTGGAAGAGATACACCTCATATCC
ACAACCCCTTCGTCATCGTGTGGTGCTTATTGGATGGGCTTTAATATGGA
CTATGTCCCTAAACTCTGTATTCTGTGGAGAAAAATTGGCTTTACTGTCG
GCCACCTTGCGGACATATCAAAAAGCGGCATGTGACTCGGATCAAGTGCT
TATAGCCTGTCCCCGTGGTACTAGTATTTCAATCGAGTTTGCCCAGTACA
ATAAGTTTGTTGCGAAAGACGGCTACAGTATTGAAGAATTATGTCCTGGG
TCTGGGGAAATAAGATCGGAAATCCGGGGTAGAACAAAGCACCTTCTTCG
CGGATCGATCTTTGGCTCACCACCACTAAAAACACCGTCTAGCAAATACA
TGACTGCTGGCCACTCCCTTGCAGTCCCAGTACAATCTGTTCCTGAATTC
AACAGTAGCAGTGCCACTAGCTCCGAATCAATTTCAAGCGTGTCCCCTTC
AGTTGATGATATTCAAAGTACTGATTACAATACTGACAACGCTTCCGAGA
ACTGCATGTGGCCAAATGCATTACAGTACTCCTTACTGCAAACTGTCGTC
GAGGCCTGCCAAAAAAAGAAGCACTGCAAGTTCCACGGATCCCCAGAGTT
CTACGGCCAGGGCTCCAGTGGTGTGGGCGACTCGTCTGGAACCAGCAGCT
ACCACAGCAGCACAGCCAGCTCCAATGCAATAAGCAACGATCCTTGTCCA
AAACGCAAAAAAATTGTCGAAGTCGCTTACAAATGTCGCCCATATGAGTT
CCGAAGTAAGTGGCTTGTCACAATGATGTAGCACAACTAGAGTGCATCCT
TACTCCCGTATAGCCGTATATAGTGCCAGCTTTGGAAGAACCGAGTACGA
GAGCATTCGTGTTCCCCAACGCAAGGAGTTCGAGAAGAAACCTTTTCTCG
CTTCTATGCCACGAAAACTGTAATGCAATTGCCCATGGTGAACGTCCGAT
GCAACTTGCGAGTCGAAGCAATAACTTTGGGAGCCCT
FMO14301.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42402-RE | 4654 | CG42402-RE | 916..1947 | 10..1037 | 4685 | 97.6 | Plus |
| CG42402-RC | 4016 | CG42402-RC | 407..1309 | 139..1037 | 4040 | 97.2 | Plus |
| CG42402-RD | 4915 | CG42402-RD | 1306..2208 | 139..1037 | 4040 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4094147..4094456 | 267..576 | 1550 | 100 | Plus |
| 3R | 32079331 | 3R | 4095772..4095998 | 574..800 | 1090 | 98.7 | Plus |
| 3R | 32079331 | 3R | 4081690..4081819 | 10..139 | 650 | 100 | Plus |
| 3R | 32079331 | 3R | 4093945..4094074 | 139..268 | 650 | 100 | Plus |
| 3R | 32079331 | 3R | 4099866..4100015 | 794..940 | 555 | 96 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:11 has no hits.
FMO14301.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:11 Download gff for
FMO14301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42402-RE | 913..1906 | 4..996 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:11 Download gff for
FMO14301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4094149..4094456 | 269..576 | 100 | -> | Plus |
| 3R | 4095775..4095991 | 577..793 | 99 | -> | Plus |
| 3R | 4099866..4100015 | 794..940 | 96 | -> | Plus |
| 3R | 4081687..4081819 | 4..139 | 97 | -> | Plus |
| 3R | 4093946..4094074 | 140..268 | 100 | -> | Plus |
