FMO14303.5prime Sequence
969 bp (757 high quality bases) assembled on 2015-04-08
> FMO14303.5prime
TCAATCGACATGTCGCTGAAACACCAGAAGCAATCCTACCAACCGCTCCC
AACGGCGGCCGCCATGGACAATCCGGCGATGATCCAAAGCAGCGGTAGCA
GTGGGAGCAGCTCCTCTGAGGAGGGCGGGAGTCGTGAGGATGTGGCCAAT
CTATCGCCGCTCGGACTGCCTACGACCTACTCGTCGCAGCAATTGATGCC
CTCGGATACGGACAGCATGGAGGAGGAGCGGCACCGACTGCGTCCCCACC
ACCATCACCACCACCCACTGGGCGAGCACCACCACATCCCGGGCATACCA
CCATCCGCCGTCGTGCCATCGCGTCTCTCCAGCGTGGACAGATCGCAGTG
GTTCACCGTTACCGTGCTATGCTTCGTCAACCTCATCAACTACATGGATC
GCTTTACGATCGCAGGAGTTCTCACAGATGTCCGAAATGATTTCGATATT
GGCAATGATAGTGCCGGACTTCTCCAGACGGTCTTCGTTATCTCGTACAT
GGTATGCGCCCCCATCTTCGGCTATCTGGGCGATCGTTACTCCCGCCCCT
GGATAATGGCGGTGGGCGTGGGTCTGTGGAGCACCACCACCCTACTGGGG
TCGTTCATGAAGCAGTTTGGATGGTTCATCGCCTTCAGAGCGCTGGTCGG
GATCGGCGAGGCATCGTACAGTACCATCGCACCGACGATTATCTCGGATC
TGTTCGTGCACGACATGCGCTCCAAGATGCTGGCACTGTTCTACTTTGCC
ATACCCGTGTATCCGGTCTGGGATACATTGTGAGATCCAAGACAGCGCAC
CTGACCAACGATTGGCGCTGGGCTCTGACGGTCACGCCCATTCTGGCATT
GTGGCACTTTCCTCATTTTGCTGATCATGAATCCGGTGCGGTGTCGCACG
AGGGGTCCTCCAAATTGGAAAGCACCTTACTACAAGATGTACTCCAAGGC
GGTGAGTACGAACCGTTCC
FMO14303.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spin-RA | 3007 | CG8428-RA | 397..1295 | 10..904 | 4215 | 98.2 | Plus |
| spin-RB | 3394 | CG8428-RB | 397..1295 | 10..904 | 4215 | 98.2 | Plus |
| spin-RC | 3198 | CG8428-RC | 397..1295 | 10..904 | 4215 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16125377..16125783 | 10..416 | 1990 | 99.3 | Plus |
| 2R | 25286936 | 2R | 16131539..16131899 | 413..772 | 1740 | 99.4 | Plus |
| 2R | 25286936 | 2R | 16132308..16132433 | 772..895 | 425 | 92.9 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:15 has no hits.
FMO14303.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:14 Download gff for
FMO14303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spin-RA | 395..1298 | 7..907 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:14 Download gff for
FMO14303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16125375..16125782 | 7..415 | 99 | -> | Plus |
| 2R | 16131542..16131899 | 416..772 | 99 | -> | Plus |
| 2R | 16132309..16132446 | 773..907 | 91 | == | Plus |
