FMO14304.5prime Sequence
1011 bp (916 high quality bases) assembled on 2015-04-08
> FMO14304.5prime
TCAGTCGACATGTTTGAGCGCTTCCGACTGAACAACCTGACTAGAACCTT
TCGCCTGCGAGGAGGCGGCCCAGAACTGGCGCGCGACAAGAAGACCCCGC
AACGGCAGCAATGCGTCACCGTCCTATTCCTAGATGACATCACGCACACC
TTTCGGATCGAGAAACGTGCGAAAGGCTCTGAACTCCTGGATCAGGTCTT
TCAGTATCTCGAGTTATCCGAAAGGGACTACTTTGGCCTACTATTTCCAC
AGAAGCCAGGTGACGTCGTGAGATGGGTTGATGCTCAGAAGCAGTTTAAG
AAGCAATGCAGCAGCGTTTCCCTCGACAACGATGCCGTACCATTATTAGA
GTTTAGGGTTAAGTTTTTTGTAAGCGATCCCAGCCGACTGCAGGAGGAGT
TCACACGCTACCAGTTCTATCTGCAGATCAAGCGCAACATTCTACTGGGC
AAGCTGCCCTGCTCCAGCAACACCCAGTGCCTGCTTGCCAGCTACACTGT
GCAATCCGAGTTGGGTGACTTTAACGCATTAGAACACCAGCCGGGCTATC
TGAGCGGAATGCAGCTGCTCTGCGACCAGACAACGGAGGCGGAGCGGAAG
GTTGGAGAACTGCACAAGTTGCACCGTGGGCAGCTACCGGCGGACGCGGA
GTACAACTACCTGGAGCACGCTAAGCGATTGGAGCTATACGGGATTGACC
TGCACAGGGCCACCGACTCCAACGGCAAGGAGCTGCAGCTGGGCGTATCG
GCCGTCGGACTGCTCGTCTTCCAGCATTCATTGCGCGTGAACACTTTCTC
GTGAGCAAGATGGTCAAGGTGTCGTTCAAGCGTAAGACTTCTTCATCCAG
TTGCGCGCGAGCCCAGCGAGAACTACGATACTTTGCTGGCCTTTGGATGA
GCAGCCACAAGCACGCCAAGCGCTTTGGAAGTCCTGGCGTGGGAGCACAC
AGCTTCTTCCGGCTTAAAGCGGACACCACAGCCTTTCTAAGCTCCTCAAA
TACAGTTTGGG
FMO14304.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptpmeg-RK | 4079 | CG1228-RK | 631..1635 | 9..1011 | 4585 | 97.8 | Plus |
| Ptpmeg-RJ | 4028 | CG1228-RJ | 580..1584 | 9..1011 | 4585 | 97.8 | Plus |
| Ptpmeg-RI | 3596 | CG1228-RI | 459..1463 | 9..1011 | 4585 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 352838..353273 | 506..936 | 1900 | 98.4 | Plus |
| 3L | 28110227 | 3L | 351625..351778 | 9..162 | 770 | 100 | Plus |
| 3L | 28110227 | 3L | 352624..352771 | 358..505 | 725 | 99.3 | Plus |
| 3L | 28110227 | 3L | 352298..352407 | 161..270 | 550 | 100 | Plus |
| 3L | 28110227 | 3L | 352475..352568 | 270..363 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:17 has no hits.
FMO14304.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:16 Download gff for
FMO14304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptpmeg-RK | 626..1602 | 1..980 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:16 Download gff for
FMO14304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 351620..351778 | 1..162 | 97 | -> | Plus |
| 3L | 352300..352407 | 163..270 | 100 | -> | Plus |
| 3L | 352476..352568 | 271..363 | 100 | -> | Plus |
| 3L | 352630..352771 | 364..505 | 100 | -> | Plus |
| 3L | 352838..353312 | 506..980 | 96 | | Plus |
