FMO14305.5prime Sequence
995 bp (917 high quality bases) assembled on 2015-04-08
> FMO14305.5prime
TCAGTCGACATGTACAACCTTATCAAGGGCTCCTTGGCAACATACTGCTG
CCTGTGCCTGCTACTGATATTGATTGACCCAGCGGAATCGGGACAACTGT
CAACGAGATTCAACGTGAGCTTCGCCCAGCTGGATTCCTGCGAAACCTAC
TCCGTTCCGAATACGGGCTATGGCTACCGGAGGTTCTACATGCTGCGCGA
GCTGAGCAACAACAACAGGAAGGCCGGAGAGCGGCTGCACTTGAAATTCT
ACGTCCTGACCGCCATGGATGCGCACATCCTGCTCTCGGTGACGAATCAC
CCGCGCCCAAATGATCGCGTTTACGAGATCGTGATAGGAGCCGGCGGAAA
TACGTTTTCCGCAATCCGGAATGCTATGGGAATGAGGCGGGTGGCCACGA
ATCAAGAGCCGAACTTGGTATCGCTGTACGACCCGACGCCAATTGAGATT
GTCCAAAACCAGAATGGCGAGCTGTTTGTTTACATACCCGGCTTCAAGAA
GGAGCCCCTGCTGCAGTTCATCGATGAAGCACCGCTGGTCATCAACTATC
TGAGTTTCAGCTCCTTTGGTTCCAATACGGCGCGGTGGTTTTACGACTGT
GGCTTCGATGGTTATGGGTCGGAAATTGCACCGATAGTGAAGGAGGAAAC
GAAGACGGAAAAACTGCTAAGCCATCTGAATATCCAGGCGGAAAATGCAA
GCATGCCGGCTAATCTCAGCTCCATATCGTTCCACTTCCAAACGCGCTCC
CTCGCCTACGAGCAAACCAGTTCCTTGCTTCAGACCCGCATGCACATGAT
GATGCACTGGAGGATAGTCGTCTTGTCTGGAAACCCGAGGACTTCGCTCG
CTGGATCTTTCGAACATCCTGACCTTCGTATATGGAAGCGCATATGAACG
TCCTCCACGGCGCCCCTGCATCATGGTCAAGTCCTCCATCCTATGGGGCT
GATAGCTCTACGCCACGAGCATCACCCTGTAGCTTAATCTCCACT
FMO14305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NtR-RA | 1876 | CG6698-RA | 48..1027 | 10..981 | 4515 | 98.2 | Plus |
| NtR-RB | 1855 | CG6698-RB | 48..1006 | 10..981 | 4190 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22127855..22128176 | 10..331 | 1610 | 100 | Plus |
| 2R | 25286936 | 2R | 22128693..22128881 | 616..804 | 945 | 100 | Plus |
| 2R | 25286936 | 2R | 22128473..22128626 | 464..617 | 770 | 100 | Plus |
| 2R | 25286936 | 2R | 22128281..22128413 | 331..463 | 665 | 100 | Plus |
| 2R | 25286936 | 2R | 22128962..22129068 | 812..915 | 370 | 96.3 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:19 has no hits.
FMO14305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:18 Download gff for
FMO14305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NtR-RA | 48..1042 | 10..993 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:18 Download gff for
FMO14305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22128473..22128625 | 464..616 | 100 | -> | Plus |
| 2R | 22128694..22128881 | 617..804 | 100 | -> | Plus |
| 2R | 22127855..22128176 | 10..331 | 100 | -> | Plus |
| 2R | 22128282..22128413 | 332..463 | 100 | -> | Plus |
