FMO14306.5prime Sequence
1017 bp (921 high quality bases) assembled on 2015-04-08
> FMO14306.5prime
TCAGTCGACATGAAAACCTCTGGCGCCAGCAATACTGACGAGCTGAACAA
GTCATCGCACAGCAAAGTCAGCAAAAAGTCCACTAAGTCGCGATCTAAGT
CGGCGAAATTGGAGTTGACTGGAAAGAATTCCCTGTCGGCATCCGCATCA
TCCTCCATCGCATCCGCAGTGAGCGGGGGCGTTGCAGTGGGCAGCCTGCC
GGCCACGCCCACTCACCTAAACATGGTGACAACGCCCACCACGCCAACAT
CTAGTCTGGGTAACTACAATCTGTTTGACGCCTCATTTGCGGTAGCAGGA
AGTGGTGGGCACGGACTTGCAGGCGGCATCGCGGGCGCAGAAGCCTCTGG
CAACTCCAGTCGAATGAAGAGCTATGCTGGTTTCGATCCGCGCAGCATCA
AGATCTTTTGGGAGCAGCACGACCAGACCGATGTGGAACTCTCCCAGGAT
GTGTGCGCCCGTTTGGCGGAAGATGCCTCCTACAAAGTCTGGGAGCTGAT
CAATAATGTCAAAATATACTCGCGCCACTCGGGCGGAGTGGTGACATACG
ACCTGGTGAACGAAGTGCTAAAAGATGCCGATGTGCCGCCTATGCTGGGT
GCGATGGACAGCGACTGGGACCGGATCGACTATGACGGCAGTTTTTACTT
TCACTCGGATAAGATCTTCGAGCTGAGCGCGGAGTTTCAGAAGGAAGTCA
ATCTGTGCACACCTGATGATGCAGACTTTCAGAGCATCTGCCCAGTGGAG
GATAAGCACATGGACCAACTAAGACAGTGTGTCCAGAGTCTTGTGACGGC
AGCCCTTTTTGCGGACAGCAAATCCCAGACGGCCGCCGTCTGCCATGCTT
TTCAGACACCCTGATGGGATCCTATCTACCGAGTGATTGTGAGTAAGATG
GTCCAGTTGCTAGACCTCTTAAGCAGCAGGACCATTTGAGCCGCGATGCG
GGCGACTGGCTCCGAGCATGCACTTCCAACGCCCCTGCTTAATCAATGGC
TGCCGGCCGGGAGAATT
FMO14306.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Saf6-RB | 2407 | CG3883-RB | 120..1119 | 10..1010 | 4720 | 98.5 | Plus |
| Saf6-RA | 2416 | CG3883-RA | 120..1128 | 10..1010 | 4620 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 814739..815221 | 989..505 | 2065 | 97.3 | Minus |
| 2L | 23513712 | 2L | 815475..815831 | 366..10 | 1785 | 100 | Minus |
| 2L | 23513712 | 2L | 815275..815413 | 504..366 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:05:21 has no hits.
FMO14306.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:20 Download gff for
FMO14306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Saf6-RB | 115..1102 | 3..995 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:20 Download gff for
FMO14306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 814734..815221 | 505..995 | 97 | <- | Minus |
| 2L | 815275..815412 | 367..504 | 100 | <- | Minus |
| 2L | 815475..815836 | 3..366 | 98 | | Minus |
