FMO14309.5prime Sequence
1030 bp (943 high quality bases) assembled on 2015-04-08
> FMO14309.5prime
TCAGTCGACATGTCCCAATCCGCGGGGGACATTCGCAGACCTATCAAGTC
GCCCCAGATGCAAAACAAAAAAACCCAGACACTAGAGTCTGTCCATAAGT
CACACAAACACACAAAGAAGTGCCAATGTAAATCCAGGAGACAGGATTCC
AAAGTTAGCTCTTGTCAGACGGACATTCATCATCCGGAAAGGGAGCAGCA
AGAAATTCAGCCACTCATGAGAGACCAAAGGAAAGCTAAACAGCGCCATG
AAAAGGATCATCAACTGGAAAGGGAACAGCAAGGAATTCAGCAACTCACG
AGGGACCAAAGAAAAGCTACAAAGCGCGAAAAGGTGCGCGAGCAAGAGCG
ACAGTACACGGCGGCTCAGTTCGAGAAAATTCGGGGCAATAGGCGGCATG
TGAGCAAGGAGAACCAGCAGCCCGAGAACCCTGTAGTAAATCCCTCCACC
GGCGTCACAGCCTCCTCATCAACCACTTCATTAGACGTTGGATCCGGTAG
TAGACCGCGAGGGGTATTGGATATAGGAATCGAGTTGGTCTGTTCTCTGG
TAAAATCTCGCAGCCTCAGCCAGGGACAGAAGAAAAAACTCGTCCGTGAT
ATAGCCAGGCGTATCTCCTGTCTGGAACTGACCGAATCCAGCACTAGTTC
GCGTTCCCTGAGCAGCAGCAGCAAGGAGCAGTTGAAGGTGCCTACAGGTT
CTCTGCAGCAAGTTGCGGCCACCAATACGAACCAATCCAATGCGAGAAGC
TCATCCAAAGCTGACGTATTGCTCCACCAGTTCCCGCTCCACGAAAGCGA
GCAGCTATCGGATCATCTTCGCCACTGCCTGAAAGCGTATCGTACAGTGC
TCAACCAGTGGCTCAGGCGAGGTGATCACCCAGAAGACAAATATACCGAA
TCCGCAATGCCTCAACGGATGCAGAAAATGAGCCTTGGATTTGCAGGAAT
TGGGCTGAATCCCATGACCCTGGAGTGAAATAAAATTTCTAAAAACGGTT
TTAAGGGTGGCACGGGATTCTCGAGCGAAA
FMO14309.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12184-RB | 3310 | CG12184-RB | 518..1533 | 9..1029 | 4695 | 97.9 | Plus |
| CG12184-RC | 2876 | CG12184-RC | 102..1117 | 9..1029 | 4695 | 97.9 | Plus |
| CG12184-RA | 3292 | CG12184-RA | 518..1533 | 9..1029 | 4695 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4629740..4630419 | 688..9 | 3400 | 100 | Minus |
| X | 23542271 | X | 4633878..4634389 | 688..177 | 2230 | 95.7 | Minus |
| X | 23542271 | X | 4629403..4629687 | 972..688 | 1130 | 96.9 | Minus |
| X | 23542271 | X | 4633541..4633825 | 972..688 | 1130 | 96.9 | Minus |
| X | 23542271 | X | 4635312..4635412 | 109..9 | 400 | 93.1 | Minus |
| X | 23542271 | X | 4634953..4635013 | 174..114 | 275 | 96.7 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:05:26 has no hits.
FMO14309.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:26 Download gff for
FMO14309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12184-RB | 513..1499 | 2..992 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:26 Download gff for
FMO14309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4629385..4629686 | 689..992 | 95 | <- | Minus |
| X | 4629740..4630424 | 2..688 | 99 | | Minus |
