FMO14312.5prime Sequence
966 bp (933 high quality bases) assembled on 2015-04-08
> FMO14312.5prime
TCAGTCGACATGGATATCAGCTATATCTTCGTCATCTGCCTGATGGCCCT
GTGCAGCGGCGGCAGCAGTCTCAGCCAAGTCGAGGGCAAACAGAAATCCG
GAAGGGGCCGGGGCTCCATGTGGTGGGGCATTGCCAAGGTCGGCGAACCC
AACAACATTACGCCCATCATGTACATGGACCCAGCGATCCACTCTACGTT
GAGAAGGAAACAGCGACGCCTGGTCAGGGACAATCCCGGTGTACTGGGAG
CCCTGGTCAAGGGCGCCAACTTGGCCATTAGCGAGTGCCAACACCAGTTC
AGAAATCGCCGCTGGAACTGCTCGACGAGAAACTTCTCGAGGGGCAAAAA
TCTATTCGGCAAAATCGTTGATCGAGGCTGCCGAGAGACGAGCTTCATTT
ACGCAATCACCAGCGCGGCGGTGACCCACTCGATTGCCAGGGCCTGCAGT
GAAGGAACGATAGAGTCCTGCACCTGCGACTACAGCCACCAGTCGAGATC
TCCACAAGCGAACCACCAGGCGGGCAGTGTGGCCGGCGTGCGGGATTGGG
AGTGGGGCGGCTGCTCCGACAACATCGGATTCGGGTTCAAGTTCTCCCGG
GAATTCGTCGATACCGGCGAGAGGGGTCGCAATCTGCGCGAGAAGATGAA
TCTGCACAACAACGAGGCGGGTCGAGCGCACGTCCAAGCGGAGATGCGAC
AGGAGTGCAAATGCCATGGCATGTCCGGATCGTGTACAGTGAAGACCTGC
TGGATGCGACTGGCCAACTTCCGTGTGATTGGCGACAATCTGAAGGCCCG
CTTCGATGGAGCCACCCGCGTGCAAGTGACCAACAGTCTCCGGGCCACCA
ACGCTCTGGCCCAGTTAGTCCGAATGCAGCCGGCTCGAATTCCGTGGGCT
CCAACGGCCTGATTATTCCGCAGTCCTGGTCTTGTCTTACGGCGAGGAAG
AAGGAACGTATGCTGG
FMO14312.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wg-RA | 2919 | CG4889-RA | 434..1387 | 10..965 | 4640 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7312836..7313139 | 375..678 | 1520 | 100 | Plus |
| 2L | 23513712 | 2L | 7309385..7309637 | 125..377 | 1265 | 100 | Plus |
| 2L | 23513712 | 2L | 7314317..7314602 | 678..965 | 1200 | 97.6 | Plus |
| 2L | 23513712 | 2L | 7307592..7307708 | 10..126 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:09 has no hits.
FMO14312.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:09 Download gff for
FMO14312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wg-RA | 425..1387 | 1..966 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:09 Download gff for
FMO14312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7307583..7307707 | 1..125 | 96 | -> | Plus |
| 2L | 7309386..7309636 | 126..376 | 100 | -> | Plus |
| 2L | 7312838..7313139 | 377..678 | 100 | -> | Plus |
| 2L | 7314318..7314602 | 679..966 | 97 | | Plus |
