FMO14313.5prime Sequence
1042 bp (923 high quality bases) assembled on 2015-04-08
> FMO14313.5prime
TCAGTCGACATGAAACCCGCTGCGATTCCGGCTAGCGAGCGGCGTCTGGC
CTTCGTGGCCGAGTGGTTCCATGCAGAGGCTGGAATCATACGCACCTTTC
TGATCACCTACTATGTATCCGACAAGGCCGTGGAAGTGTTCGACCAGCGC
AACAAGCGCACATTTCTGCGACGCACCAAGATCCCGGAGCTGACCCAGCG
CGACTTCTTTGTGGGCTCCAAGATCAATGTCTTTGGCCGGCAGTTTGACA
TTGTGGATTATGCTGACGACACTACGCGGACAAACCTAGCCAAATATCGC
AAGAAGGGATTCGTTTTGCTCAAGAACAATATGTGGACGAAGCACCTGGG
CAAGTTCCTAAAGACTCTGATCGACAACAAGATTAACATAAACCAGGGCA
TGATGGTTCAGTTCTCTCCCAAAATGGTAACTCAGTTTCTGTCCGGCAAG
GACACGACGGATGTCTCCTCTTCAGTCCTTATGAACGAGCTGCTGGCTGG
TCCGGCCATTAGTCTGGAGCTAATCGGCGACAACGTAGTGGAGACCATCA
AGGCCTGCGCCCAGTACAAGAGCACAGAGGCGGAAACACCCAGTGTGAAA
CTGTCGCCCAGTTTGGAAGAGCTGTTTGAAAGTGAGGAGATTCGTTATGG
ATTTTACTACTCTGATAACGACAACGACGTGGAAATGGACCTAAAGTTCA
TATCTGAGGCGAGGCACAGCATAATTAAAGAATGTGTATTCAAGAATACA
ACACTTGCCATCATTAAGCCGCACAGCATCAAGGATGGTCTCCTGGGAGA
CATCATTTCCGAAATCCTGTCGAATGGCTTTCGGTTGACAGCCATGCGCA
TGATTCTAATGGCCCGAATCAACTGCGAGGAGTTCTACGAAGTCTACCGC
GGAGTGGTGCCCGGAGTATATACCATGTTGCTCAGTGGCCATGGAGTATG
CCTGGTGCATGGAGAATTGCTTGCGCCGATTCCGAAAAGAAAACCTGATA
TCGCCGAGATCCGCACCTTCTGTGACCACCTGGATTCCGGAG
FMO14313.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nmdyn-D7-RA | 1392 | CG8362-RA | 142..1171 | 9..1042 | 4780 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9680717..9681238 | 474..994 | 2250 | 97.9 | Plus |
| 3R | 32079331 | 3R | 9680273..9680441 | 138..306 | 845 | 100 | Plus |
| 3R | 32079331 | 3R | 9680499..9680666 | 306..473 | 840 | 100 | Plus |
| 3R | 32079331 | 3R | 9680080..9680209 | 9..138 | 650 | 100 | Plus |
Blast to na_te.dros performed 2015-04-08 10:05:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 1768..1830 | 718..781 | 137 | 72.3 | Plus |
FMO14313.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:32 Download gff for
FMO14313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nmdyn-D7-RA | 142..1145 | 9..1015 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:32 Download gff for
FMO14313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9680080..9680209 | 9..138 | 100 | -> | Plus |
| 3R | 9680274..9680440 | 139..305 | 100 | -> | Plus |
| 3R | 9680499..9680666 | 306..473 | 100 | -> | Plus |
| 3R | 9680717..9681255 | 474..1015 | 97 | | Plus |
