FMO14316.5prime Sequence
1019 bp (926 high quality bases) assembled on 2015-04-08
> FMO14316.5prime
TCAGTCGACATGCACGCAGGTGGAAAATATTGCGGTCCTCGGCATTGTAG
TTTCTATATCATAGCATTCCTTATCTGTCAGTTGTTTTTCTTAGTCATAT
TTATACGGAATGATGATGCTTCAAGCGCCAATGAACTGTTATCTTTCATG
AATGAGAGTGAGGAGAGTGACCACCTGGATTGGCGCGTATTCATATCCCA
TACACCAGAAACATCGGAGGATTTTTACCAATACAATATTCATTTGAGTA
ATGCTTTGGGTCTTATACGTAAGTTGCCCGTAACAAGGCATCATAGTTGT
ACTACACGTAATTCTATACTTCCTGCCCCTTTGGAGGCCAATGTGAGTGT
GGTGATTAGTTTCCACAATGAAGCGCGTTCTATGCTGCTGCGTACCATTG
TGTCCCTGCTGAGTCGCTCGCCGGAGGACTATCTGCATGAGCTAATCCTT
GTGGACGATGGCAGTCAGCGAGATGTGACCCTGCTGGATGACCTCAAGCG
ATGGATGGGCGGGGTGTTCGGGTCGAGATATCGCCTTGGGCTCACCTTCC
TCAGGAACCAGGAGCGCATGGGCCTGATTTGGTCGCGCAACAGGGGCGCC
TCCTTGGCCAGTGGACGTTATGTGCTCTTTCTGGACAGCCACTGCGAGGT
GAACGAGGGCTGGCTGGAGCCACTGCTGGAACGGCTTGCACTCAATACCA
ATCTGGCAGTTAGTCCACTACTTGATCCCATTGACCCGACCACCCTGAGC
TACCGGAAGGCAACGAGTTGCTGAAGGGCGGATTTGACTGGTCCCTACAC
TTTCACTGGCTGAAACGACAGCTGACCAACCAGGAGAGCCTGGAGATGCC
CTACCAGAGTCCTGCCTTCGCTGGCGGCGTACTGATGATGTCACGCGAAT
GGTTCTTTAAGCTGGGCAGCTTCCACCCGGATCTGAAGATCTGGGGGCGG
TGAGTCAATCCGAGCTGGGCATTAAATTGTGGCTTGTCGGGGGAACAAAT
TGAGGATCGAGGCTGGAAG
FMO14316.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10000-RA | 2597 | CG10000-RA | 88..1085 | 5..1004 | 4770 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28750466..28750930 | 938..475 | 2230 | 99.1 | Minus |
| 3R | 32079331 | 3R | 28750985..28751166 | 475..294 | 910 | 100 | Minus |
| 3R | 32079331 | 3R | 28751225..28751385 | 296..136 | 805 | 100 | Minus |
| 3R | 32079331 | 3R | 28751444..28751574 | 135..5 | 640 | 99.2 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:05:40 has no hits.
FMO14316.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:40 Download gff for
FMO14316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10000-RA | 85..1089 | 1..1009 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:40 Download gff for
FMO14316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28750985..28751163 | 297..475 | 100 | <- | Minus |
| 3R | 28751444..28751577 | 1..135 | 97 | | Minus |
| 3R | 28751225..28751385 | 136..296 | 100 | <- | Minus |
| 3R | 28750466..28750929 | 476..938 | 99 | <- | Minus |
