FMO14317.5prime Sequence
1007 bp (918 high quality bases) assembled on 2015-04-08
> FMO14317.5prime
TCAGTCGACATGCTACGCCGAATTGGTTTTTGTTTTTGTTTTTCCGATAA
TGAGCCCACGCCTATTCAAACAATGTTCTGCGGAGCTGGCAGTTATTGCT
TCCCGCTGATGACAGCAATCGGTGGGTCAACATATGGCACGATGATACCC
AAATCAGGCGGAGATTATGCCTATATAGGCACTGCATTTGGTCCTCTGCC
TGCGTTCCTTTATCTGTGGGTGGCCCTGCTGATCCTGGTGCCCACGGGCA
ATGCGATTACGGCTCTGACTTTTGCCATATATCTGCTGAAACCTTTTTGG
CCTTCCTGCGACGCGCCCATTGAAGCTGTTCAGCTGCTGGCGGCTGCCAT
GATATGTGTGCTGACGCTTATCAATTGCTATAATGTTAAGTGGGTTACGC
GTGTGACGGACATCTTTACGGGCACCAAGGTGGTTGCCCTCCTGGTGATC
GTTGGCGCCGGAGTCTGGTGGTTGTTCGATGGAAACACAGAGCACTGGGA
TAATCCCTTCTCGGGAGGCCTTCAAGATCCTGGATATATAGCCCTGGCCT
TCTATAGCGGCCTCTTCTCGTACTCCGGCTGGAACTATTTGAACTTTGTA
ACAGAGGAGCTCAAGGATCCGTACCGAAACCTGCCCAAGGCCATTTGCAT
CTCAATGCCGGTGGTCACGGTCATCTATATGATCACGAATATTGCATACT
TTTCGGTTCTCTCGCCAGACGAGATCCTTTCGTCAGATGCAGTGGCAGTC
ACGTTTGGCGACAGATGCTGGGGTATATGTCCTGATTATGCCCTTCGCTG
TGACCTGCTCCACTTTTGGTTCGCTGAATGGAGCGATCTTCGCGTCCTCG
CGACTTTTCTTCGTCGGTGCAAGGATGGTCACCTGCCCGGCCGCCATTTC
GCTGAATAAACGTAATTGCCTGACACCTGTGCCCTCCCTGTAATTCTCGG
GCGTGCTCCACCTTGCTGCTGCTGTTCATCAGAAAGCTACGTACTAATCA
CTACTTC
FMO14317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mnd-RD | 2046 | CG3297-RD | 393..1260 | 136..1000 | 3995 | 97.9 | Plus |
| mnd-RA | 2491 | CG3297-RA | 838..1705 | 136..1000 | 3995 | 97.9 | Plus |
| mnd-RC | 2376 | CG3297-RC | 723..1590 | 136..1000 | 3995 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14990146..14990732 | 356..940 | 2650 | 98.3 | Plus |
| 3L | 28110227 | 3L | 14989848..14990069 | 136..357 | 1110 | 100 | Plus |
| 3L | 28110227 | 3L | 14988305..14988416 | 26..137 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:42 has no hits.
FMO14317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:41 Download gff for
FMO14317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mnd-RD | 393..1268 | 136..1007 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:41 Download gff for
FMO14317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14988233..14988249 | 10..26 | 100 | -> | Plus |
| 3L | 14988306..14988415 | 27..136 | 100 | -> | Plus |
| 3L | 14989849..14990067 | 137..355 | 100 | -> | Plus |
| 3L | 14990146..14990735 | 356..943 | 98 | -> | Plus |
