FMO14318.5prime Sequence
1024 bp (920 high quality bases) assembled on 2015-04-08
> FMO14318.5prime
TCAGTCGACATGAGCACACAAACTCGTTCAGGCGGCGGGGGAGGCGGCGG
CCATGCCCGCAACCAGAAAAAGTCAAATGCCAGCAACTCCGGCGGAGGAG
GAACCGGCCATCACGATGGAGTCTCACATGCTGCGGCCGCTGGCAAGAAG
GGAGGCCAGGATGCCAGCAAGACAGACAAGCCAGAGAAGGCCCAGCCCAA
GGCTACCACCGAACAGTTGCGCATTGCCCAGATCACCAATAGCACCACAG
AGGATCCGCAGATCAACGAGAAGGTTCTCCTTCTTTTGACCATGACCCAA
CGTTCCGAGGAGGAGGTCTGCTGTGCCCTCAACGAGTGCGATTACGACCT
GGAGGCCGCGGCCAACTTCTTGATCGAGGAGCTACCGCAGGGCGCCTTTG
CCAAGTACGAGAAAAAGCGCAAGAACAAGGCTGCAAATAACACGGCTGAT
GGTGCTGCTGGCGATGGCGATTGGGCCGATGGCAATGGCAATGCGGACAG
GCGGGAAAAGTCGCGAAACCGCAGCTCAAATCGCGGAGGCACCCGTGGCT
CCAGTGACAGTCGTGGATGGCGCGGAAGAGAGACTCGTGAGAATGAGCGC
AACCAGCGCGAATCTCGCGAACCTTGGTCCGGGCAAAACGCTGGTCAGGA
CCGCGGTGACGATCGGGCAAATGACAACTACCGCGGGCAGCGCAACGGCG
GCGGACGCAGTGGTCCCGGTGGCGGTGGACGCGGTGGTGGCTTTGTCTCT
CGCTCTGGCCGTGGCGGCGGCCGCATGGGGGGACGCACCGGTGGACCGCG
TGCGATCGCGGCAGCGGAGGCCCTGGTGGTGCTTATGGATCAGGTCGCGG
TGGCCATGCAAACGAGGATCACCACGAGGTTGAGCTGTGGGACACACCAT
TGCCCAAAATGCCGAAAAGCAGCACAGCTCATGACGATGCCTGGGGCGAC
TGGAACAACAAGAGATACGAGGCTCGCTTCAAGACAGCAGGGTTCACACT
ATCAACTTGGCAAGCCAATCCCTG
FMO14318.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lig-RL | 4835 | CG8715-RL | 64..1083 | 10..1021 | 4705 | 98.1 | Plus |
| lig-RK | 4835 | CG8715-RK | 64..1083 | 10..1021 | 4705 | 98.1 | Plus |
| lig-RJ | 5116 | CG8715-RJ | 71..1090 | 10..1021 | 4705 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8069899..8070280 | 10..391 | 1910 | 100 | Plus |
| 2R | 25286936 | 2R | 8070821..8071228 | 569..972 | 1755 | 97.1 | Plus |
| 2R | 25286936 | 2R | 8070333..8070513 | 389..569 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:44 has no hits.
FMO14318.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:42 Download gff for
FMO14318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lig-RL | 55..1041 | 1..983 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:42 Download gff for
FMO14318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8070335..8070512 | 391..568 | 100 | -> | Plus |
| 2R | 8069890..8070279 | 1..390 | 98 | -> | Plus |
| 2R | 8070821..8071239 | 569..983 | 97 | | Plus |
