FMO14322.5prime Sequence
977 bp (873 high quality bases) assembled on 2015-04-08
> FMO14322.5prime
TCAGTCGACATGGAGTCCAATATATATTTAGTTTTTCTATTGACGTTTCT
GCTGTACAATAATGCCAGAGCCGAAATCAGCGATCATCTGCGGGAGGACA
TACCGGACTTAGACATGGAGCTCTCCTCCGCCTCATCCGCCCATCTCAAT
GGCAAGGAGCTACCGGCCGTGCCACAGAACTCGGTGCAGACGCATCCCAG
GAGACACATTAAGAGTAAGCGCCGCATGAAGAGAAGATACAAATGCTACT
CCTGCGAGCCGCCCTGTCGGGATCCCTATGAGTTTACCCACACCTGCCAG
AATGCGATTCAGTGCTGGAAGTCGCGCACACGCGATGCCGATGGTCAGGT
GCAGGAGTCACGCGGCTGCAGCACCTCGCCGGATCAACTGCCCATGATCT
GCAGCCAGAACTCCTTGAAGATCAACGGGCCCAGTAAACGCAATACGGGG
AAGTTCGTGAATGTGGTCTGCTGTGCCGGTGATTACTGCAATGAGGGAGA
CTTTCCGGAACTGCTGCCCTTCGACAGCAATGATGTGACGGTGATAACCG
CGGATACCAGTAGCATAAGCAAGATGCTCGTCGCCGTTCTGGGTCCTTTT
CTGGTCATCGCTCTGCTGGGCGCCGTGACCATCTTCTTCATTCGTCGTAG
CCATCGCAAGCGTCTGGCTGCCTCGCGAACCAAACAGGACCCGGAAGCGT
ATCTGGTCAATGATGAGCTGCTCCGCGCCACCAGCGCCGGGGACAGTACG
CTGAGGGAGTATCTGCAGCACTCGGTGACCTCCGGCTCGGGCAGCGGATT
GCCGCTGCTAGTGCAGCGTACGCTAGCCAAACAGGTCACCCTGATCGAGT
GCATTGGAAGGAGGCTAATAACGGCGAGTTTTGGCGCGGTCACCTGGGCA
TGGGCGAAAACATCGCCGTGGAAAATTATTCTTTCAGCCCCGACAGAGAA
TCCTCGTAATGGGGGAACGAAGAAATT
FMO14322.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sax-RC | 2451 | CG1891-RC | 55..960 | 10..920 | 4370 | 99 | Plus |
| sax-RB | 2716 | CG1891-RB | 545..1225 | 235..920 | 3245 | 98.7 | Plus |
| sax-RA | 2415 | CG1891-RA | 244..924 | 235..920 | 3245 | 98.7 | Plus |
| sax-RB | 2716 | CG1891-RB | 417..546 | 71..200 | 650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7807705..7808286 | 310..893 | 2775 | 99.1 | Plus |
| 2R | 25286936 | 2R | 7807070..7807202 | 69..201 | 665 | 100 | Plus |
| 2R | 25286936 | 2R | 7807567..7807644 | 235..312 | 390 | 100 | Plus |
| 2R | 25286936 | 2R | 7806538..7806598 | 10..70 | 305 | 100 | Plus |
| 2R | 25286936 | 2R | 7807314..7807351 | 199..236 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:28 has no hits.
FMO14322.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:28 Download gff for
FMO14322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sax-RC | 48..974 | 1..937 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:28 Download gff for
FMO14322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7806531..7806598 | 1..70 | 94 | -> | Plus |
| 2R | 7807072..7807201 | 71..200 | 100 | -> | Plus |
| 2R | 7807316..7807351 | 201..236 | 100 | -> | Plus |
| 2R | 7807569..7807644 | 237..312 | 100 | -> | Plus |
| 2R | 7807708..7808288 | 313..896 | 98 | -> | Plus |
