FMO14324.5prime Sequence
972 bp (935 high quality bases) assembled on 2015-04-08
> FMO14324.5prime
TCAGTCGACATGTTTTACGCCGTCGATTTTGATAAATCATATTTACGCAT
TTGTCTAAAGAGTAAAAAAAATATTTCAAGTTTTCCAGAAGAAACGTTAG
TCATGGAGGAATTTAATTCGAGCGGATCAGTAGTTAATGGTACAGGATCT
ACGGAAGTTCCTCAATCTAATGCTGAAGTTATAAGGGGACAAATATTTGA
AGTTGGTCCTAGGTATATTAAACTCGCCTATATAGGTGAAGGAGCTTATG
GCATGGTTGTGTCTGCGGATGACACGCTAACAAACCAAAGAGTTGCAATA
AAAAAAATATCGCCCTTTGAACACCAAACTTATTGTCAAAGGACTCTCAG
AGAAATAACCATATTGACCAGATTTAAACATGAAAACATTATTGATATTC
GAGATATTCTTCGAGTTGATAGCATAGACCAAATGAGAGATGTTTATATT
GTACAGTGTTTGATGGAGACTGATTTGTATAAACTACTTAAAACACAGAG
GCTAAGTAATGATCACATCTGTTACTTCTTATATCAGATATTGCGTGGAC
TCAAGTACATTCATTCCGCAAACGTCTTGCATCGGGACCTTAAGCCAAGT
AATTTACTGTTGAACAAGACGTGCGACTTAAAAATTTGCGACTTTGGATT
GGCTCGTATTGCAGATCCCGAGCACGATCATACTGGCTTTCTCACAGAAT
ACGTTGCTACCCGATGGTATAGAGCACCTGAAATAATGCTTAACTCAAAA
GGATACACCAAATCTATAGACATATGGTCCGTTGGCTGCATTTTGGCTGA
AATGTTAAGTAATCGGCCAATATTTCCTGGAAAACATTACCTGGATCAAC
TTAATCATATTCTTGGAGTATTGGGTTCACCGTCCCGGGACGATTAAAGT
GGTATTATTATTGAAAAGGCCACGGAACAATTTGGAATCTTTACCATTTA
AGCCAATGTGTACCCTGGGGCC
FMO14324.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rl-RI | 2072 | CG12559-RI | 10..967 | 10..969 | 4645 | 99.2 | Plus |
| rl-RE | 1573 | CG12559-RE | 10..950 | 10..969 | 4380 | 97.4 | Plus |
| rl-RD | 1795 | CG12559-RD | 277..1172 | 72..969 | 4335 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 1113198..1113484 | 634..920 | 1345 | 97.9 | Plus |
| 2R | 25286936 | 2R | 1212216..1212503 | 634..920 | 1195 | 95.1 | Plus |
| 2R | 25286936 | 2R | 1207919..1208169 | 634..884 | 1165 | 97.6 | Plus |
| U | 3151297 | U | 1722541..1722766 | 660..884 | 1005 | 97.3 | Plus |
| 2R | 25286936 | 2R | 1072251..1072441 | 72..262 | 955 | 100 | Plus |
| 2R | 25286936 | 2R | 1105844..1105981 | 496..633 | 690 | 100 | Plus |
| 2R | 25286936 | 2R | 1076635..1076761 | 261..387 | 635 | 100 | Plus |
| 2R | 25286936 | 2R | 1080331..1080441 | 388..498 | 555 | 100 | Plus |
| 2R | 25286936 | 2R | 1071984..1072045 | 10..71 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:32 has no hits.
FMO14324.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:31 Download gff for
FMO14324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rl-RI | 10..968 | 10..972 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:31 Download gff for
FMO14324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 1071984..1072045 | 10..71 | 100 | -> | Plus |
| 2R | 1072251..1072439 | 72..260 | 100 | -> | Plus |
| 2R | 1076635..1076761 | 261..387 | 100 | -> | Plus |
| 2R | 1080331..1080441 | 388..498 | 100 | -> | Plus |
| 2R | 1105847..1105981 | 499..633 | 100 | -> | Plus |
| 2R | 1113198..1113486 | 634..920 | 97 | -> | Plus |
