FMO14328.5prime Sequence
1049 bp (955 high quality bases) assembled on 2015-04-08
> FMO14328.5prime
TCAGTCGACATGTTTGACAACGCGATTAAACCTCATCCGGAGGCCAATGG
AGCTCCAATAAATGCAGCAGGAGATCGGCCGATAACTACTGTCATTAATA
TTGAACCAGAACCAGAAACCGAAAGTCCAATTGGGATCTTCACATCACAA
CCGGAAAGTCAACAACAACAACCCGAGCAGCTCCAATCCGAATCCGAGTC
CGACAGAATGGCCAATTTTGACGATACGTTGCAACGCGCCCGCCTTGCCT
TTTCCAGTGGAAAGACCAGGAATGTCAGCTTTCGACGCAAGCAGCTGGAG
AATTTGCTGCGTTGCTATGAGGAGCACGAGAACGAGATCATCAGCGCCTT
GGAGGCGGATCTGCGACGTCCCAAGCAGGAGAGCCTCATCGTGGAAACGG
AATTCATGAAGAACGACATCAGGCACATCCTATTCCAGCTCGACGAGTGG
GTGCAGTCGGAGAAGCCGCCCAAGTCGTTTGTGAACATGATGGACGACGT
CCAGATCTACAATGACCCCTTCGGAGTGGTTCTGGTGATCGGCGCCTGGA
ACTACCCGCTGCAGCTGCTGCTCGTGCCAGTGGCTTCCGCCATCGCCGCC
GGAAACTGTGTGGTGATCAAGCCCAGCGAGATTGCCGCCAACTGCGCCAA
GTTCATTGCCGATGTCATTCCAAAATATTTGGATAATGATTGCTATCCAG
TTGTCTGCGGTGGACCCAGCGAAACGGCGGAGCTGCTCAACCAGCGTTTC
GACTACATCTTCTACACGGGCTCCACGCGCGTAGGCAAGATTATCCACGC
CGCGGCCAACAAGTACTTGACCCCCACCACCTTGGAGCTGGGTGGCAAAA
GCCCCTGCTACATTGACAAATCTGTGGACATGCGCACTGCGGTCAGCGCA
TCCTGTGGGGCAAGCTGATTTACCTGCGGACAGACCTGCATCGCTCCGGA
CTACATTCTCTGCTTCAAGGAGGGTGCAGGAGAAGGTCCATCCTGGAGCC
AGACGTGCTGAGGAATGTTACGCGGGAATTCCAGCAGTCCGATCTATGC
FMO14328.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aldh-III-RQ | 2923 | CG11140-RQ | 982..2025 | 10..1046 | 4825 | 98.1 | Plus |
| Aldh-III-RP | 2306 | CG11140-RP | 461..1504 | 10..1046 | 4825 | 98.1 | Plus |
| Aldh-III-RO | 2448 | CG11140-RO | 340..1380 | 10..1046 | 4770 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7470393..7470617 | 688..464 | 1125 | 100 | Minus |
| 2R | 25286936 | 2R | 7470702..7470883 | 465..284 | 910 | 100 | Minus |
| 2R | 25286936 | 2R | 7469909..7470072 | 851..688 | 820 | 100 | Minus |
| 2R | 25286936 | 2R | 7473722..7473844 | 225..103 | 615 | 100 | Minus |
| 2R | 25286936 | 2R | 7469713..7469847 | 985..850 | 490 | 95.6 | Minus |
| 2R | 25286936 | 2R | 7473288..7473346 | 284..226 | 295 | 100 | Minus |
| 2R | 25286936 | 2R | 7475440..7475494 | 64..10 | 275 | 100 | Minus |
| 2R | 25286936 | 2R | 7475342..7475381 | 103..64 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:06:09 has no hits.
FMO14328.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:00 Download gff for
FMO14328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aldh-III-RQ | 972..1984 | 2..1011 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:00 Download gff for
FMO14328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7470702..7470882 | 285..465 | 100 | <- | Minus |
| 2R | 7473288..7473346 | 226..284 | 100 | <- | Minus |
| 2R | 7473722..7473843 | 104..225 | 100 | <- | Minus |
| 2R | 7475342..7475380 | 65..103 | 100 | <- | Minus |
| 2R | 7475440..7475504 | 2..64 | 93 | | Minus |
| 2R | 7469685..7469845 | 852..1011 | 92 | <- | Minus |
| 2R | 7469909..7470072 | 688..851 | 100 | <- | Minus |
| 2R | 7470394..7470615 | 466..687 | 100 | <- | Minus |
