FMO14329.5prime Sequence
1023 bp (904 high quality bases) assembled on 2015-04-08
> FMO14329.5prime
TCAGTCGACATGAGTATTGCCGACGTGGAGTACGAATATGTTGTGTTAAA
AATAAACGGTTACGATATTAGTCATTTGTCGAGGTATGAAGCGGTTCAAA
AGTTCCTTCAATCTAAAGAAACCCTTGTCGTAGAAATACGCAGACAGAAA
CACAATGCATTAGATTTAGAATTAAAACATGGCTCCAATGCCAAAATATC
AAAAGTGGACAATCCCGGAGAACTTTCTGTCCTAACTGACAAGTCAGCAG
AAGGGACGATCACAGCTGCCAGTGCCTCTCAACAAATAAATTGCCCATCT
TCAACATCGTTGAAAGAAATCGAGACGAAAACTCCTGTGGTTTTAACTCT
TCGGGCTAGAAGTCATGAGGATCGTTTGGGAAGTCTACAAGCCGCATCGA
AGGAAACTCAAACCCAATCTGTCGTTGGTACGGACGTTTTAAAGGATAAC
GATTTGGTTAACACAATTACCGACAACTTCATAGAGCATGAACACCATTT
GTTCGAACAATGCCTGGAACCGGAAATCGACATTGAGGAAGACGATGATG
ACGAAGATATACATTTTGAGTATGCTAATACATTTCTGCCAGATGACTAT
ACAAATGTAGTGGATAAATTGGATAAGGTTTTGTTAACTCACGTCAAGTC
TTTGGAAGAACTATCCAATAAATCCGCCATGCAATCTGACGAATGCTATC
ACATACCAGAAAAGAACTCATCTGATTCAAACGTTAAAATATCTTCTTTG
GCGAAAAATATCATTGAGCAATCTACCAAGTCCTGTAGTAAAATAAAGCT
TCGACCGAATGCAAACTTGGATTATAAAAAAAAAATTCAATCTACCTTTA
AGCCAAGAAGAGTTCTTCTGCATATGAGTACGATGAAGCGAGCACATTTA
CGAAAACCATTCCCGAAGATTCTGGAAGGTGAACCACTGTATTGTTCCCG
GTACCAACGGTTCAACGACAAAACGTCATAGGTGGTTCTACTCTCCCATA
GCATCGGAACCGGGCGAATCATA
FMO14329.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Slip1-RB | 2500 | CG1783-RB | 81..1092 | 10..1022 | 4635 | 97.7 | Plus |
| Slip1-RC | 2663 | CG1783-RC | 81..612 | 10..541 | 2660 | 100 | Plus |
| Slip1-RA | 2818 | CG1783-RA | 81..612 | 10..541 | 2660 | 100 | Plus |
| Slip1-RC | 2663 | CG1783-RC | 927..1410 | 538..1022 | 1995 | 95.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 663855..664341 | 52..538 | 2435 | 100 | Plus |
| 4 | 1348131 | 4 | 665949..666434 | 536..1022 | 1800 | 94.9 | Plus |
| 4 | 1348131 | 4 | 667538..667721 | 673..856 | 555 | 89.2 | Plus |
| 4 | 1348131 | 4 | 667430..667539 | 536..645 | 415 | 91.8 | Plus |
| 4 | 1348131 | 4 | 663701..663746 | 10..55 | 215 | 97.8 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:06:11 has no hits.
FMO14329.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:02 Download gff for
FMO14329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Slip1-RB | 73..1066 | 1..996 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:02 Download gff for
FMO14329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 663693..663742 | 1..51 | 92 | -> | Plus |
| 4 | 663855..664340 | 52..537 | 100 | -> | Plus |
| 4 | 665951..666408 | 538..996 | 95 | | Plus |
