FMO14332.5prime Sequence
997 bp (893 high quality bases) assembled on 2015-04-08
> FMO14332.5prime
TCAGTCGACATGTTCAGCACCCGAATATCCGGCGATATGAAGATCTTTGC
CGCAGATGTTGCCGAGAGCAGCGTCACAGCAACATGCAACACGTCCGTAC
AGCAGCAGCAGTCGCAGCAACTTGAGTTCCGGACACGAATGTCCGCCGGA
TCGCCGAGCTCCAAGTCGGGACAGTGTCATCTGAAGTTCGGGAAGTACAA
CAATAAAACGGCCAATCTGCTGCGCCAGGTGAATAGTTGCCACAGCAGTA
ACAGCAGCAGCAACACAAGCAACAACAACAACGAGGCCATCAAGGGACAA
CAACAGCAGCCACTGCACTACTGCAACAGCAACAACAGTCACTCGTGGGC
CCGAAAGAAATACTTTGGCAATGGCAACAGCAACAACAGTCTGCTGCAGC
AGCAACAGCAACCATCTTCGTTCTTCCAGCGGCAGCAGCAGCAACACCAA
ATGCAGATGCAACAGGAGAAGCAGGCGACGAACAACAACGATGCGCTGAT
GAAGAATCAGAATGTTGTCAACGCACACGTGTCTGATTGCAAGTCTAGCG
ATAGCAACAACAACAGCACCAGCAGCAGCAACAACAACAGCACCATCAGC
AGCAACAACAACAACACTAGCAGCGCCAGCAACAACAACACTGGCAGCAG
CAGCAGTTGCAGCAACAGAACAAAGCCAGCCAAATGGCTCAATGAGAACA
GTAGCAGCAGTAGCAGCAGCAACAATAATAATATCAGCTGCAGAAATAAC
AACACCAGTAGCATTGATACCAAGCGACGCAACTCATCAGCGGGCGCAAC
TGCCGCTTACTATCGCAAGTCGGAATCGGAATCCGGAAGCTCGGAAGTGC
AGCAGATCGACGAAACGGAGCACTCGAACAGTGGCTGCACAGCACAGACT
GCCGAATCGTCGAGGTGCAGAATGGTGGCCCTCAGCACATGGTTAAACAG
GATAGAGAGATCGAACGGTCAGCAGCCGCGCACAGCACCTCTGAAGG
FMO14332.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wisp-RC | 5320 | CG15737-RC | 750..1681 | 10..934 | 4365 | 98.6 | Plus |
| wisp-RB | 5124 | CG15737-RB | 557..1488 | 10..934 | 4365 | 98.6 | Plus |
| wisp-RA | 5127 | CG15737-RA | 557..1488 | 10..934 | 4365 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11894764..11895601 | 10..847 | 4190 | 100 | Plus |
Blast to na_te.dros performed 2015-04-08 10:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2219..2877 | 146..809 | 566 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..3054 | 79..830 | 526 | 57.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2527 | 548..763 | 465 | 69.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2853 | 298..806 | 461 | 60.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2329..2563 | 547..791 | 435 | 67.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2458..3155 | 67..763 | 426 | 58.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6412..6940 | 269..808 | 420 | 59.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2688 | 373..786 | 416 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6738..6928 | 553..758 | 409 | 71.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2689 | 427..795 | 408 | 61.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6524..7012 | 241..728 | 396 | 57.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2508 | 595..806 | 373 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6738..7252 | 235..781 | 370 | 57.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2384..2889 | 239..756 | 363 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6410..6899 | 327..803 | 352 | 57.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6706..7192 | 285..773 | 350 | 56.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2677 | 323..684 | 329 | 58 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..7006 | 371..673 | 291 | 61.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..7088 | 369..717 | 280 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6628..6824 | 610..803 | 221 | 61.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1051..1178 | 623..754 | 208 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2517 | 697..902 | 207 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6851 | 697..806 | 191 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2810..2981 | 239..414 | 184 | 59.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1059..1177 | 646..774 | 173 | 64.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1023..1148 | 665..800 | 171 | 63.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2407 | 659..763 | 166 | 64.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1376..1587 | 552..762 | 164 | 58.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1063..1190 | 368..502 | 155 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6815 | 711..806 | 149 | 65.7 | Plus |
| BS | 5142 | BS BS 5142bp | 2035..2140 | 374..481 | 147 | 62 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3254..3501 | 393..646 | 137 | 53.7 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 976..1006 | 697..727 | 128 | 90.3 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3224..3321 | 644..738 | 123 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1614 | 380..488 | 122 | 59.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1543..1602 | 697..757 | 122 | 68.9 | Plus |
FMO14332.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:08 Download gff for
FMO14332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wisp-RC | 747..1685 | 7..937 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:08 Download gff for
FMO14332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11894761..11895622 | 7..866 | 99 | <- | Plus |
