FMO14335.5prime Sequence
997 bp (898 high quality bases) assembled on 2015-04-08
> FMO14335.5prime
TCAGTCGACATGGGAAGGATCTTTGGCGGGGATTTTGGCTCCGTCGAACC
GGGCAAGAGTGAAACTGTCTCCCTGGTCTGGCCCACTGTGTCTCTGTACA
ACCGTGTGGGCAGCTGCCCCATTCTAATCTCAGCCACAAGTGCCCACGCT
ACGGATGCAGTGGCAACCGCGAGGCAGGTGCTGCACTTTGACACCCGCTT
TGAGACCCTGGATCCGCACGGCAACAAGCTGCGCCGGCGGAAGGATTACA
AGGACTGTCGCAACTGGGACAAGGATTACCTGCGCAACTGCACACCGCTG
AACTGTGAGGAGCGTTACTTTGGGAAACGGAGCTTTTTCAATAGGGAAAC
GGAACAGTGCGAACCGGTGACTGATTGCTCGGCCCCAGGCGAGTACTACG
ACATCTTCAGCAACGAGCGCGTCGATCCTGGCAATTTCGTGTCCGAGGAG
GAGCTGGACCTCATTAAGCAAGGAAAGTTCGACTTTAATTTTTTGGATTT
GCGGGGGCCACCATCGCAGCATGAGCCGAAAGCCAACAAAGCGCTTCCTT
ACAAGAAAAATACCAGGCCAACAAGGCACTTTGTCCATTCCAAGCATGAG
AAGTCAGATGATTGCGACAATTTGCGTAAGCTAACCCTGGCCGATTTTAA
CGACTGCTTTCAGCATTTGCAGGATGGTCAGTCCGAGCCGGTCGCAGTTG
AACCCACAATCGAGAAGAAAATCAAGAAAAAATCGCCATTTGAGGTGCCC
ATGCTAACGCAGCTCTATTACGACTGGTATCTTCCTTTAAGAGCGATAGC
TGGGGGGAAGCGGAGAAATCGGTGCCATAGTGATCCCAGTCCACAAAATG
TCTCATCGGATCGGAACCCCTCATCACGGTGATCGGCAAGCTTGAATGGA
AGGCTGCTGTCCTGAATTCCTCGAGAAGCTTTTCATCTTATTAGCTATTG
AGTTCAGGATTTCGCCACTCTGACACGCGATTATAAAAGGCCATTTG
FMO14335.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31279-RB | 1482 | CG31279-RB | 251..1224 | 10..974 | 4420 | 97.9 | Plus |
| CG31279-RE | 1454 | CG31279-RE | 251..1145 | 10..903 | 4275 | 98.8 | Plus |
| CG31279-RD | 1525 | CG31279-RD | 321..1215 | 10..903 | 4275 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16431281..16431707 | 90..516 | 2135 | 100 | Plus |
| 3R | 32079331 | 3R | 16432114..16432505 | 516..903 | 1700 | 98 | Plus |
| 3R | 32079331 | 3R | 16431111..16431191 | 10..90 | 405 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:59 has no hits.
FMO14335.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:51 Download gff for
FMO14335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31279-RB | 247..1232 | 6..982 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:51 Download gff for
FMO14335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16431107..16431191 | 6..90 | 97 | -> | Plus |
| 3R | 16431282..16431707 | 91..516 | 100 | -> | Plus |
| 3R | 16432115..16432494 | 517..892 | 98 | == | Plus |
