FMO14336.5prime Sequence
962 bp (821 high quality bases) assembled on 2015-04-08
> FMO14336.5prime
TCAGTCGACATGCGGGGCTTATCAGCGTTTCTGCTTTTGCTCTGCCTCCA
ACGGGTGAAGTCGGACGAATCTGCTGCAGCACGGCGCCCCAACATAATCA
TCATTATGGCCGACGACATGGGCTTCGATGATGTGAGCTTTCGAGGCGGA
CGGGAGTTTCTAACTCCCAATATCGACGCCCTGGCCTATCACGGTCGTCT
ACTGGATCGGCTCTACGCTCCGGCAATGTGTACTCCATCTCGGGGAGCAT
TGCTCAGCGGCCGGAATCCAATACACACGGGCACACAGCACTTTGTAATC
AGCAACGAAGAGCCTTGGGCCCTGACCCTCAATGCCACATTGATGCCGGA
GATCTTCAAGGAGGCAGGCTACTCCACCAACCTGGTGGGAAAATGGCATC
TGGGCTTCTCGCGCCCGGAATACACGCCCACTCGGCGGGGATTCGATTAC
CACTTCGGCTATTGGGGCGCTTATATAGACTACTTCCAGAGACGATCCAA
GATGCCGGTGGCCAACTATAGTCTGGGCTACGATTTCCGGCGGAACATGG
AGTTGGAGTGCCGGGATCGTGGGGTTTATGTAACTGATTTGTTAACCGCC
GAGGCGGAACGATTGATCTAAGACCATGCTGATAAGGAGCAACCCCTATT
CCTGATGCTCAGCCACTTGGCTGCCCACACGGGCAACGAGGATGATCCTC
TGCAAGCTCCCGAGGAAGAGATTCAAAGTTTTCCTACATTATGATCCCAA
CCGAAAGAAATATGCAGCGATGATCTCCAACTGGACCAGAGCGTGGGACG
TATAATAACCGCTCTGTCTTCTACTGATCAACTGGAAATTACATAGTGAT
CTTCTACTCCGACAAAGGAGCTTCATCGGATGAATGATTCCATGACGGGT
TCAAATTCCCACTCCGCGAAAGAAAAATAACCTCCTGCAGAGCCGCGATA
CAGTGCGCTGCT
FMO14336.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32191-RC | 2419 | CG32191-RC | 400..1327 | 10..929 | 4140 | 97 | Plus |
| CG32191-RB | 2077 | CG32191-RB | 58..985 | 10..929 | 4140 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17807842..17808331 | 767..280 | 2275 | 98.6 | Minus |
| 3L | 28110227 | 3L | 17808419..17808580 | 281..120 | 795 | 99.4 | Minus |
| 3L | 28110227 | 3L | 17808636..17808747 | 121..10 | 560 | 100 | Minus |
| 3L | 28110227 | 3L | 17807659..17807774 | 879..766 | 390 | 93.1 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:06:01 has no hits.
FMO14336.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:53 Download gff for
FMO14336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32191-RC | 400..1331 | 10..935 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:53 Download gff for
FMO14336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17807842..17808330 | 281..767 | 98 | <- | Minus |
| 3L | 17808420..17808579 | 121..280 | 99 | <- | Minus |
| 3L | 17808637..17808747 | 10..120 | 100 | | Minus |
