FMO14338.5prime Sequence
1052 bp (925 high quality bases) assembled on 2015-04-08
> FMO14338.5prime
TCAGTCGACATGTGGTGGTCAAGTGGTGCTCCTCTCGTGGAGCTACTTCT
GCTTGGGTCCCTGGTGATTGGTAGAGTCAGCTCCCTGATATGCACGCGCC
GTCCAGCGAACACGGGCTCGCCCAAATCTCCGGTGGATGAGAACTTTATG
ATAAGCGTGTCGGGTAATCCGGAAACGTACATTCTCGGCCAGGAATACAA
CGTCTCTCTTAATGCCTTCAATGGCCACCGCTACATTAGCTTTATCATGG
CACTGGAAAACGAGAATGGTGACTTTAGCTACAACGATGACTTGGGTCGC
TTTGAGCTGAGCGACTTGATTGAGACCCGGTTCAGTCCGAACTGCATCAA
CATGGTGGAGAACACCAATACGAACTCCAAGACGCACATGCACTTGACTT
GGGTGGCGCCCAGTGAGCCGGGCAGTGGCTGCGTTCTGATCCGGGCCACA
GTTCAGCAGCATCGCGAGGTGTGGCACATGGATGATGGCGGTTTAACAAA
ACGCATCTGCGAGGAGGTCACCGATGATGTGGAAAGTCAGCCAACTGCTC
CGGCGGCAGTGGATGTGCCCTGCTGTGCATGCGATGAGGCGCGCTATGAG
CTTATATTTGAAGGCGTCTGGTCCAGGAACCTGCATCCCAAGGACTTTCC
CACTCGAGGCTGGGAGACTCGATTCTGTGAGCTTCTGGGAGCCGCCCACA
GTTCGGATTATCGTTTCTGGGAGTCCGGAGAACTGGGCCAGCGTGGCTAT
GAAGGATATGCGGAACATTGCAGTTCGCGTCTGCTGGAGCGAGAGTTCAG
CATTAATTTTCGGGATCAAAAGATACGGACGATAATCAAGGCACGGGGCC
CATCGTATCCCAACATAAGCAGCAAGACAATGGCTCGTGGCGAGTAGAAT
CCCATTCACCCACATGGTGGTCCTTTGCCTCAGATAGACCCTCTCCGGAT
TGGATTTGTGGGGCGTACTGGACTGGACTATGCTGGCGCACTGCACATGG
ATGGAGGAAAAATGATCACCTAATATCTTGGAGTGGGACAAGATTCGTTC
CA
FMO14338.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30046-RC | 2986 | CG30046-RC | 70..1083 | 8..1018 | 4675 | 98.1 | Plus |
| CG30046-RB | 2632 | CG30046-RB | 70..1083 | 8..1018 | 4675 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12314621..12315019 | 202..600 | 1995 | 100 | Plus |
| 2R | 25286936 | 2R | 12315077..12315292 | 599..814 | 985 | 99.1 | Plus |
| 2R | 25286936 | 2R | 12314186..12314380 | 8..202 | 975 | 100 | Plus |
| 2R | 25286936 | 2R | 12315352..12315553 | 813..1012 | 460 | 91.7 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:06:32 has no hits.
FMO14338.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:18 Download gff for
FMO14338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30046-RC | 64..1097 | 1..1031 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:18 Download gff for
FMO14338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12314180..12314380 | 1..202 | 98 | -> | Plus |
| 2R | 12314622..12315019 | 203..600 | 100 | -> | Plus |
| 2R | 12315079..12315291 | 601..813 | 99 | -> | Plus |
