FMO14339.5prime Sequence
1026 bp (929 high quality bases) assembled on 2015-04-08
> FMO14339.5prime
TCAGTCGACATGGCCATGATTTTCACACGGAAATCGCTGAAGCTGCTCAA
CTATCGCCTCAAATGCCTAAGTTTGTCCTGCCCAGGAGGAAGGAGAGGAA
TCCAAAGCAGTTCCAACGGAGAAGCGCCCTCCGTGGAAGTCAACTTCAGC
AATGGACGTAACATGACCTTCAGTTCCGGCCGCCTGGCGAGATTTGCGAA
TGGAACAGCTGTGTGCCAAATGGGCGATACCGCCGTCATGGTCACCGCGG
TGGCCAAGGCGAAGCCAAATCCCGGCCAGGGATTCATGCCTCTGGTGGTT
GACTACCGACTGAAAAACGCCGCCTCTGGCAGAATACCCATGAACTTTAT
GCGCCGCGAACTGGGCCCCTCGGAAAAAGAGATCCTGTCCGCCCGCCTTA
TCGACCGTTCGCTACGCCCGCTCTTCCACAAAGATTATCGCACGGAGACA
CAGCTGGTGTGCAACATGTTGGCTATGGACGCGGTGCACAGTCCGGATGT
GCTTGCAATCAATGCCGCTTCCATGGCGCTATCTCTAAGTGACATTCCCT
GGAATGGACCCATTGGAGCTGTGCGCGTTGGCCTCTGCGACGGCGAGGTG
CTGATCAACCCCACGCGCCGGGAGCTGCAGACTTCGCAACTGGATTTGGT
AGTCTCCGCCACCAAACAAAACCTCGTCGTTATGTTGGAGGGCAAGGGGA
ATGTGGTTCTTCAGCAGGACCTTCTAAAGGCTATCAAACAAGGGACTCGT
GAGGCCCAATTCATTATCCACGAGATCGAGCGACTGCAGAAGCCTATGGT
CGACAGAAGCGCGAAGTGGAAGTGGCTGCCGAAGTAGATCCCGAACTGGG
GAAAGCCGTTCGTAGCATGTGCGAAATGCGCTGAAAGAGATCTTCCAGGA
TTCGACGCACCGACAGATGTCTCGTGGACATGCGGTTAACGAGGTGCGCC
TCCACGTTATTGACAAGAGGTGGGAGTTCGTTTCCGGATAACGAACCGCT
CGCTATTACGAGCAGTTCACCGACCA
FMO14339.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11337-RE | 2647 | CG11337-RE | 115..1126 | 10..1019 | 4725 | 98.4 | Plus |
| CG11337-RD | 2821 | CG11337-RD | 12..1023 | 10..1019 | 4725 | 98.4 | Plus |
| CG11337-RA | 2668 | CG11337-RA | 136..1147 | 10..1019 | 4725 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31403936..31404356 | 575..155 | 2105 | 100 | Minus |
| 3R | 32079331 | 3R | 31403452..31403876 | 998..575 | 1770 | 96 | Minus |
| 3R | 32079331 | 3R | 31404412..31404557 | 155..10 | 730 | 100 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:06:33 has no hits.
FMO14339.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:20 Download gff for
FMO14339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11337-RE | 112..1134 | 4..1025 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:20 Download gff for
FMO14339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31403936..31404355 | 156..575 | 100 | <- | Minus |
| 3R | 31404412..31404560 | 4..155 | 98 | | Minus |
| 3R | 31403422..31403875 | 576..1025 | 96 | <- | Minus |
