FMO14346.5prime Sequence
989 bp (889 high quality bases) assembled on 2015-04-08
> FMO14346.5prime
TCAGTCGACATGACAGCTGAAATAAATAAAGGACCCCTGCTGGGAATGCG
ACACGTTCAAACCCTATTGCTTTTTTTCAACATCACGTGTTTGTACATCG
GTCGACTGAATGTGGGAGTAGCCGTGGTGGCGATGACAAACGCCGAGTCA
ACTAATCCCGATTTTCCAGAATACGATTGGACTCTGACCCAGAAGTCGTA
CATATTATCCAGCTTCTTTTGGGGATATATCATCACCCAGTTCCTGGGCG
GATATCTGTGCAAGCGTTATGGAGTCAAGAGTGTCATGCTCTGGGGCTCC
TTTGCATCGGGTATCTTCAGCGCTTTGACCCCGCTCTTCATCGGATTTGG
TGAATGGCAAGCCTATTGCGGTATTCGAGTCCTGATGGGATTTGCCCAGG
GCCTGATCTTTCCCTGCATCCATCAGCACTTGGCCAGATGGTCACCGCCG
GCGGAGAGGAATCGCTTGGGTGCCCTCAGTCACACAGGAATTGAGTGTGG
CAACGTGTGTGCCATGTTCTTCAGTGGAATGATAGCCAAAAGTGCCATTG
GCTGGCCTGGAATATCGTATGTCTCTGCAGGATTAGCCTTAGCCTGGTGT
GCATTTTGGTTCGTTTTCGCTGCTGACAATGCAGAGGAATCTCGTTACAT
AACCCAGGAAGACTCCACTATATCGAATCGTCTCTGAAGCACAATGAGGA
CTATCACAAGACCGTAATTCCCGTTCCCTGATGGCGATTTGGACCTCGGC
ACCGTTTTTTGCTCTCATGGTGGCGCGTTGCTGCGAAACCTGGGGTCTGA
GCACCCTCCAGGCCCAGATCCCAACGTATATGAACGGGGTTCTGGACATG
GGACATGAAAAGCAATGCATTCCTTTTCGCGTTACCATTTCTTGGCATGT
GGATTATGTCCGTAAGGGAGATTTGATAATCGCTGAAGGTTCGTCCGCCC
GGAACAGGCTGAATTAATACGGCTCTCTACAAAAAACTT
FMO14346.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30265-RB | 1622 | CG30265-RB | 58..1023 | 10..977 | 4430 | 97.7 | Plus |
| CG30265-RA | 1771 | CG30265-RA | 207..1172 | 10..977 | 4430 | 97.7 | Plus |
| CG12490-RB | 1647 | CG12490-RB | 54..1019 | 10..977 | 2150 | 82.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22833120..22833862 | 169..910 | 3495 | 98.9 | Plus |
| 2R | 25286936 | 2R | 22835186..22835928 | 169..910 | 2010 | 85.6 | Plus |
| 2R | 25286936 | 2R | 22837916..22838620 | 169..872 | 1115 | 78.2 | Plus |
| 2R | 25286936 | 2R | 22832920..22833059 | 30..169 | 700 | 100 | Plus |
| 2R | 25286936 | 2R | 22841283..22841464 | 396..577 | 250 | 75.8 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:06:24 has no hits.
FMO14346.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:12 Download gff for
FMO14346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30265-RB | 55..996 | 3..949 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:12 Download gff for
FMO14346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22832922..22833058 | 32..168 | 100 | -> | Plus |
| 2R | 22833120..22833899 | 169..949 | 97 | | Plus |
