FMO14350.5prime Sequence
1041 bp (913 high quality bases) assembled on 2015-04-08
> FMO14350.5prime
TCAGTCGACATGATGATGGAGAACGGACTCTCCATGGAGTACGGAGATGG
CTACATGGAGCAGGAGGAGGAGTGGGAGCGCGAGGGCCTGCTCGATCCTG
CGTGGGAGAAGCAACAGAAGAAGACATTTACCGCCTGGTGTAACAGCCAT
TTGCGCAAGGCCGGTACAGCCATCGACAACATCGAGGAGGACTTCCGCAA
CGGCCTCAAGCTGATGCTGCTGCTGGAGGTGATCTCCGGCGAGACGCTCC
CCAAGCCCGATCGCGGCAAGATGCGCTTCCACAAGATCGCCAACGTGAAC
AAGGCTCTCGACTTCATCGCCTCCAAGGGCGTCCACCTGGTCTCTATCGG
CGCCGAGGAGATCGTCGATGGAAACTTGAAGATGACTCTGGGTATGATCT
GGACGATTATCCTGCGCTTCGCCATTCAGGACATCTCCGTGGAGGAGATG
ACCGCCAAGGAGGGTCTGCTGCTGTGGTGCCAGCGCAAGACGGCTCCCTA
CAAGAACGTCAACGTACAGAACTTCCATCTGTCGTTCAAGGATGGTCTGG
CCTTCTGCGCCCTTATCCATCGCCATCGTCCAGATCTAATCGACTACGCC
AAGCTGTCCAAAGACAATCCTCTGGAGAATCTTAATACTGCCTTCGATGT
GGCCGAGAAGTACCTGGATATTCCGCGCATGTTGGATCCAGATGATCTCC
AGAATACAGCTTTGCCCGATGAGCGGGCGGTGATGACGTATGTGTCCTCG
TACTATCACTGCTTCAGTGGCGCCCAAAAGGCGGAAACCGCTGCCAACCG
GATCTGCAAGGTGCTCAAGGTCAACCAGGAGAACGAACGCCTCATGGAGG
AGTACGAGCGTCTGGCCAGTGATTTGCTGGAGTGGAATCCGTCGCACCAT
GCCCCTGGGTGGAAATCCCGCCAAGGCCGACACTTCGCCTTGGTAGGGGT
TGCTGAAAAAAACTGGAGGGGTACCGCACCCTAACGTCGCAGGAACAAGC
CACCCCCGGTGTGAGCAAAAGGCAGCTGGAGAACAACTTTC
FMO14350.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Actn-RF | 3877 | CG4376-RF | 399..1420 | 10..1039 | 4595 | 97 | Plus |
| Actn-RA | 3511 | CG4376-RA | 399..1420 | 10..1039 | 4595 | 97 | Plus |
| Actn-RI | 3516 | CG4376-RI | 404..1425 | 10..1039 | 4130 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2030442..2030861 | 541..122 | 2100 | 100 | Minus |
| X | 23542271 | X | 2030215..2030370 | 694..539 | 780 | 100 | Minus |
| X | 23542271 | X | 2034955..2035068 | 123..10 | 570 | 100 | Minus |
| X | 23542271 | X | 2027935..2028033 | 873..775 | 480 | 99 | Minus |
| X | 23542271 | X | 2028664..2028751 | 781..694 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:06:54 has no hits.
FMO14350.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:39 Download gff for
FMO14350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Actn-RF | 393..1292 | 2..904 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:39 Download gff for
FMO14350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2027935..2028027 | 781..873 | 100 | <- | Minus |
| X | 2028665..2028750 | 695..780 | 100 | <- | Minus |
| X | 2030215..2030368 | 541..694 | 100 | <- | Minus |
| X | 2030443..2030859 | 124..540 | 100 | <- | Minus |
| X | 2034955..2035074 | 2..123 | 96 | | Minus |
