FMO14353.5prime Sequence
1021 bp (935 high quality bases) assembled on 2015-04-08
> FMO14353.5prime
TCAGTCGACATGGGATCGCGTATCAAAAATGACGTGAAGAAGCTCTTCGA
GTTCTGGTGCGAGGTCACGCCGACGCCGGGATTAGAGAGGGGCACGAGTT
CCAGGAGCGGCGGGCCAGCTGTTCCCGCCGGCGTGATCGTGGAGAGCTTC
CCCGAGGGATTCCGCGACCAGGAGGTGCTCACCGGCATCCCATCGTTTGC
CTTTCCCTGCGACACAACAAGCACCTCGGTGCAGACATATTCCTTTGTGC
ACACCACTGGCGATTCGAAATGGCGCTTCGGCTTCTGTCGACAGGATCCG
CGGACGAACACGGCCATGGTGCTGATAACCTACCTGCCGTGGCACGACAC
CTTCCTAAAGCTGCTGCCCGTGCTCGCCGAGCTGAGGCGGACGGATCCCA
ATGGGTTTCGCACCTTCCTCTCCGAGGCCTACAACCAGGGTATCCCGGAT
TGTGGCGGCAGCCTTAAAGTCTATTACAGCGCAGGCCAGAGTCACTTCAC
CTTCGAACGCCCACTGCAGTTCCAGTTGCCCAGCATGCCAGAAAATCACA
ACTTGAATTTGTACTACAACTTCGTGGAGCCCAAGGAGATGATTGCCGTG
TTCGCTGCGATGCTGGCCGAGCGTCGAATAATCTTCACGTCGAGACACCT
GGACAGGCTATCCTCATGCATCCAGGCGGCCAACGCATTCCTATATCCCA
TGGTCTGGCAGCACATCTTTATACCCGTGCTGCCGTGGGAGTTCAAAGAC
TACCTGGGTGCGCCCATGCCATATCTGATTGGTGTGCCAGACCCAGTGCT
CGAAACCGTCACCAGTGATGAGCTGGGTGAAGTTGTGATTCTGACTGTGA
TACGAAAATATTCGAAAGCCCATTCGACGATGTGCACAATCTGCCACGGA
GAATTGTGGTCCCCAGCTGAAGAAAGCATCTGGAATCCCAACCATGGACC
CCCTTCGGGACCGGCATTCTCGAGAATCTTCCTAACGCACATGGTGGAGC
TCACCGGTGGCTTACCGAAGC
FMO14353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18659-RI | 3513 | CG18659-RI | 390..1391 | 5..1012 | 4530 | 97.4 | Plus |
| CG18659-RH | 3759 | CG18659-RH | 527..1528 | 5..1012 | 4530 | 97.4 | Plus |
| CG18659-RF | 3816 | CG18659-RF | 390..1391 | 5..1012 | 4530 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9128371..9128643 | 492..220 | 1365 | 100 | Minus |
| 2R | 25286936 | 2R | 9127935..9128197 | 809..547 | 1300 | 99.6 | Minus |
| 2R | 25286936 | 2R | 9131164..9131358 | 221..27 | 975 | 100 | Minus |
| 2R | 25286936 | 2R | 9127788..9127877 | 896..808 | 400 | 98.9 | Minus |
| 2R | 25286936 | 2R | 9128257..9128310 | 546..493 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:06:59 has no hits.
FMO14353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:44 Download gff for
FMO14353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18659-RI | 387..1322 | 1..940 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:44 Download gff for
FMO14353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9127745..9127877 | 808..942 | 92 | <- | Minus |
| 2R | 9127937..9128197 | 547..807 | 99 | <- | Minus |
| 2R | 9128257..9128310 | 493..546 | 100 | <- | Minus |
| 2R | 9128371..9128641 | 222..492 | 100 | <- | Minus |
| 2R | 9131164..9131358 | 27..221 | 100 | <- | Minus |
