FMO14355.5prime Sequence
993 bp (890 high quality bases) assembled on 2015-04-08
> FMO14355.5prime
TCAGTCGACATGCTAGCACAAAAGTCAGTTGCCGGTGCTGATGAACTTGC
GCAAGCCAAAGGAAAATGCGTCCATTGCGCAAACGCAGCGGAAAGGGTCT
GTCAGCGCTGCGGGGACTTTTACTGCTCCAAGCATTGTCAGCGGCAAGAT
TGGCTACGTCATCGTTACATCTGCATCCCGCTGCCCGCGTTGGTTTCTCC
CAATGAATATTCCGTGTTCCAGAGCGACAGGGAATCAACTTTGGAGGGGG
CCTGTTCGTTAAACGCTGACAAATCTGTAGTTGAGGCGTCGCCAATACCC
CTCAGCCGTTCACCTATTCTTCCGGATTTGCAGTGCAATAACGCCGGCCG
TTCCAGCATCATTGCAGCCAAAGATGATATTCCCGTTTCTCCGCCAAAAG
CGATCATCCCGCCCAGCGGTGCTATGGTATACATTACGGACTTCATATCC
AGTAATCGTTGCTATATTCGCGATGCCAGCGAATCTGCTGAAAGAGCGTT
TGACGAAGTTTGCAAGAAGGTTAATACCATAGCTACGTTATTGCCCAGAA
TAAAAAATCCACCACCAAATAGATTGTGCCTAGTCCACTTTAATGGCATG
TATGTGCGAGCGAAGATGTGTAAGAAGCTCCGTGAGGTTTCCCACTTATT
TTTGGTCGATCTTGGAATCAAACATTCTGGACCTTTTTTCGATTTTAAAG
ATATCAATGATGAGTTAAAAGCATTGCCCTGTTCCAGCCAACTGGTGCAG
CTCAGAATGTATTGAATTGTGACTATTCCAATGATGTCATTGCCTTCAAC
TCGAAATTCGTGGGCAGAAATATATGGCAACCATTAAAAAGTGCCCTGGA
TTACACCTCGTGGACTAGTAAACACGAGATGACCTTTTCCGTAATGAACA
GTTAAACGCAATTTTCACAGTAAGAAGTGCTACGAAACCTAATTCTGCGG
CGAAATATCAGGTCATGGTCCTTAAAGTCGCACCTTCAATTGA
FMO14355.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:07:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9684-RA | 2146 | CG9684-RA | 79..1055 | 8..974 | 4545 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:07:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8361905..8362381 | 522..46 | 2385 | 100 | Minus |
| 3R | 32079331 | 3R | 8361242..8361683 | 951..518 | 1750 | 97.3 | Minus |
| 3R | 32079331 | 3R | 8362439..8362476 | 45..8 | 190 | 100 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:07:03 has no hits.
FMO14355.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:48 Download gff for
FMO14355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9684-RA | 72..1059 | 1..977 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:48 Download gff for
FMO14355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8361213..8361681 | 520..977 | 96 | <- | Minus |
| 3R | 8361908..8362381 | 46..519 | 100 | <- | Minus |
| 3R | 8362439..8362481 | 1..45 | 91 | | Minus |
