FMO14358.5prime Sequence
973 bp (863 high quality bases) assembled on 2015-04-08
> FMO14358.5prime
TCAATCGACATGGATTCTACTTTAAATATTGAGAATGGCAATGACCCAAC
ATCCATTGCATCTGATTTATCGGCCGAAAACACTAAAGCAGACCTTGTTT
CGCTAAATGAACCGAAGACCTATGAACCCACAACCATTGCGCCTGATTTG
AAGATGGAAAACACAAAAAACAGCATTCCATCGCCAATTAAGCCTAATGT
CAATGACCAAACATCCAGTGCATCTGATTTGACGGCCGAAAACACTAAAG
CAGACCATGATTCGCTAAATAAACCTAAGGATTTTAATAACCAAATTCTG
AACATTATATCGGATATAGATATAAATATAAAAGCACAGGAAAAAATAAC
ACAGCTTAAAGAACAAGAACTAAAACTCATTCAGAAACAGAATGATCTGG
CAAATGAAATCCATAAGCAGCAGATCCTAGCTAAGCAGCTTAGTGCACAA
AATCAGCTTAAACAAAATGAATGTCAAAGTGGAGAGCTCGACTTACACAG
TCAATATCAAAATGAGCGCGGCGGACCCACCTCGACACTGTATCAGGAAA
AAAATATAGCCAGTAAAGAATCCGCTAATGTGTCGAAGACGGTTGATTTG
CGAAAAATATTTACACCTGCGACCGATGCTGCTGAAATATTACCGAAAAA
CCGAAAGCTATATGCCTCGTCTGCATTTTATTCTCCAACACTACACCCTA
CAGTGGAAGACCAAGTCGAGCTAGCTCGAAGATTTCACATTCATTAAGCG
ATATAAGTAATCAAACCTCTAGGGTCAGTCTATGTATGTCAATCGCAAAA
ACGCTCAGACAATGGGTTCATGAAGTGGATCTCAAGGGATGATGCTATAA
ATCCATTAAAGAAATTCTGAACGAAATCCCAATGGAGAGTTGGGGAAGTT
GGAAAATACGCTAGCCTTATAATGGACCCAAACCGAAGTTCTGGATATAA
TTCGCTAAAGAATTATATAAACG
FMO14358.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1674-RK | 2917 | CG1674-RK | 195..1159 | 10..959 | 4245 | 97.1 | Plus |
| CG1674-RJ | 2419 | CG1674-RJ | 300..1078 | 196..959 | 3345 | 96.7 | Plus |
| CG1674-RH | 3016 | CG1674-RH | 897..1675 | 196..959 | 3345 | 96.7 | Plus |
| CG1674-RJ | 2419 | CG1674-RJ | 195..353 | 10..168 | 540 | 89.3 | Plus |
| CG1674-RK | 2917 | CG1674-RK | 219..298 | 196..275 | 295 | 91.2 | Plus |
| CG1674-RJ | 2419 | CG1674-RJ | 219..298 | 196..275 | 295 | 91.2 | Plus |
| CG1674-RJ | 2419 | CG1674-RJ | 299..383 | 33..117 | 290 | 89.4 | Plus |
| CG1674-RK | 2917 | CG1674-RK | 381..464 | 34..117 | 285 | 89.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 237269..237560 | 277..568 | 1460 | 100 | Plus |
| 4 | 1348131 | 4 | 240645..240834 | 653..837 | 700 | 97.4 | Plus |
| 4 | 1348131 | 4 | 240314..240410 | 568..664 | 440 | 96.9 | Plus |
| 4 | 1348131 | 4 | 236395..236475 | 196..276 | 405 | 100 | Plus |
| 4 | 1348131 | 4 | 234263..234345 | 32..114 | 400 | 98.8 | Plus |
| 4 | 1348131 | 4 | 234863..234944 | 114..195 | 395 | 98.8 | Plus |
| 4 | 1348131 | 4 | 234265..234344 | 196..275 | 295 | 91.2 | Plus |
| 4 | 1348131 | 4 | 236393..236474 | 32..113 | 290 | 90.2 | Plus |
Blast to na_te.dros performed 2015-04-08 10:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tirant | 8526 | Tirant TIRANT 8526bp | 577..646 | 320..389 | 116 | 62.9 | Plus |
FMO14358.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:33 Download gff for
FMO14358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1674-RK | 192..1173 | 7..973 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:33 Download gff for
FMO14358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 231951..231977 | 7..33 | 96 | -> | Plus |
| 4 | 234265..234345 | 34..114 | 98 | -> | Plus |
| 4 | 234864..234944 | 115..195 | 98 | -> | Plus |
| 4 | 236395..236475 | 196..276 | 100 | -> | Plus |
| 4 | 237269..237559 | 277..567 | 100 | -> | Plus |
| 4 | 240314..240398 | 568..652 | 100 | -> | Plus |
| 4 | 240645..240833 | 653..836 | 97 | -> | Plus |
