FMO14365.5prime Sequence
774 bp (774 high quality bases) assembled on 2015-04-08
> FMO14365.5prime
TCAGTCGACATGAGGGTGCACCTGAATGGTCGCGAGGTCCGGGAGCTGTT
GCGAAAGGATTTGCTGGTGCGATGGCGACAGAAAGGGCTGAGTCTGATCC
TGTTGGCCTGGCCAGTGATGGTCTTTATGCTGCTCTATCTGATCCGTCTG
AAGTACGGATCGGAGGAGTTGGAGGCCTGCCAGTATCCCACTCGCCTGCT
GCCCACCAAGAACCAAGTGGTTCCCGCTGCCTTCTCCTACATATGCAGTA
TTGAGAACCGCTGCCAGCCGGCGCATCCTTACGAGGAGTATTCCCATTGG
AAGGAGGCGCCACTGCACTCCGTGATCGATGTGGTCAACGCGTTCGTAAC
CGACGAACGGCTCCACAAGGCCGTCGTGGAGCTGGCCGAAAAGGCCAACT
TTGTGTCGGCCATAACTACATTGATCACCAGTGATCGGTTCGACATCATA
CGAAGTAACATAAGTGAAATAATTTCCCTCGTGCCCGAAATCGAACGACG
AATGAACTACAGCTTCGACATCAAACATTTGTTTTCGAATCGCGAAACCT
TCGTGAAGTTGGGCGTTCTTTTGTGTGGTCATCCGTTTCCCAATACCGAT
ACTATACCGTTGGTCAATGAAATCCTGGAATCCGAGGACTTTAGCCAGGC
CAACGATGCAGAGATCGATGCAATGCCCACCCGTCGTCGTCGTCGATACG
AAGATCTTCCCACGGACTGGAGGCCAAGTGAGCATGACCAAATATTTTTT
AATATTGCAAGCTTTCTAGACCAT
FMO14365.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34120-RB | 980 | CG34120-RB | 197..943 | 10..756 | 3720 | 99.9 | Plus |
| CG34120-RE | 7388 | CG34120-RE | 568..1285 | 10..727 | 3575 | 99.9 | Plus |
| CG34120-RC | 6688 | CG34120-RC | 568..1285 | 10..727 | 3575 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:07:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21132451..21132752 | 10..311 | 1510 | 100 | Plus |
| X | 23542271 | X | 21132805..21132951 | 312..458 | 720 | 99.3 | Plus |
| X | 23542271 | X | 21133328..21133468 | 539..679 | 705 | 100 | Plus |
| X | 23542271 | X | 21133187..21133270 | 455..538 | 420 | 100 | Plus |
| X | 23542271 | X | 21133548..21133624 | 680..756 | 385 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:07:14 has no hits.
FMO14365.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:09:56 Download gff for
FMO14365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34120-RB | 188..957 | 1..768 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:09:56 Download gff for
FMO14365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21133328..21133468 | 539..679 | 100 | -> | Plus |
| X | 21133548..21133638 | 680..768 | 95 | | Plus |
| X | 21133187..21133270 | 455..538 | 100 | -> | Plus |
| X | 21132442..21132752 | 1..311 | 98 | -> | Plus |
| X | 21132805..21132947 | 312..454 | 99 | -> | Plus |
