FMO14370.5prime Sequence
955 bp (857 high quality bases) assembled on 2015-04-08
> FMO14370.5prime
TCAGTCGACATGGACAACCTAAATTTATACGACGTTCTTAAAGTGGCTCC
GGATGCAACTGATGAGGAAATAAAAAAGAACTACCGAAAATTGGCAAAAG
AGTTCCATCCAGACAAGAATCCCGATGCGGGCGACAAGTTTAAAGAAATA
TCCTTCGCCTACGAAGTGCTGTCCGATCCCGAGAAGCGGCGCATCTACGA
CCGATATGGATTGAAGGGCCTGCAAGAGGGCGCCGAGGGATTCTCTGATG
CCTCCGAATTCTTCGCCCAGTGGTTCCCCTTCGATCGAGTCTCGTCCGAA
GGTCGGGGCAGGCGCAATGGCAAAGTCGTGGTAAAAGTGGAGCTGACCCT
GGAGGAGATCTACGTCGGCGGCATGAAGAAGAAGGTGGAGTACAATCGCC
AGAAGCTGTGCTCCAAGTGTAACGGCGATGGCGGTCCCAAGGAAGCGCAC
GAGAGCTGCGAGACCTGCGGCGGAGCTGGACGAGCGGCCGCATTTACCTT
CATGGGTCTCAGCCCCTTCGATACGACCTGTCCGACTTGCGATGGCAGGG
GCTTCACCATAAGGGACGACAAGAAGTGCAGTCCCTGCCAGGGCAGTGGT
TTCGTAGAGCAGAAGATGAAAGCGGGACCTGGTTGTGGAGCGAGGAGCAC
CGCACATGCTAAAAGTTCCCTTCGCAAATGAGGGCCACCAAATGCGAGGC
GGCGAATTTGGGGATCTGATTGTAGTCATCTCCCAGATGGAACATCCAAT
CTTTCAGCGCCGCCATGCTATCTGTACATGCGAGACCTGGAGATCACCAT
CACGGAGGCCTTGTGCGGCTACTCCCATTGTTTCAAGCACCTTGTGATGG
ACGAAACGCTTGTCTTGCGCCACGATACCCTGGTGAGAGTGGTGGCAGCC
ATCACGATCATAATGGGGTCGGAGGCAACCGGATAGTCTCGGTTTTTTTC
ACACG
FMO14370.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DnaJ-H-RC | 1636 | CG9828-RC | 126..997 | 10..886 | 4140 | 98.6 | Plus |
| DnaJ-H-RA | 1533 | CG9828-RA | 126..997 | 10..886 | 4140 | 98.6 | Plus |
| DnaJ-H-RB | 2035 | CG9828-RB | 628..1499 | 10..886 | 4140 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13164316..13164764 | 525..77 | 2245 | 100 | Minus |
| 2L | 23513712 | 2L | 13163889..13164204 | 840..525 | 1440 | 98.4 | Minus |
| 2L | 23513712 | 2L | 13164825..13164893 | 78..10 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:04:19 has no hits.
FMO14370.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:07:26 Download gff for
FMO14370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DnaJ-H-RC | 120..1004 | 1..894 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:07:26 Download gff for
FMO14370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13163841..13164203 | 526..894 | 96 | <- | Minus |
| 2L | 13164316..13164762 | 79..525 | 100 | <- | Minus |
| 2L | 13164825..13164899 | 1..78 | 94 | | Minus |
