FMO14376.5prime Sequence
816 bp (816 high quality bases) assembled on 2015-04-08
> FMO14376.5prime
TCAGTCGACATGGCGTTCACCAAGGTTCTCCAATTGATTCTCCTAGCTGT
GGTTGCCATTTCCTCTGCCGTCGACTATTGTGCTCTCCCCACCTGTCTGG
ACAAGCATGTGGCCTGTAACAACAAGGGAAACTTCAGTGAAAATTGTCCC
AAAGACGTGCGTGAGGTGAAGATCGAGCCGCATCACAAACTCATCCTCAA
TCTCTTCAACGAGTTGCGCAACAACGTGGCTGGAGGCAAAATAGAAGGAC
TACCCAAGGCTGTTCGCATGGCCAAGATGTCCTGGTGCGAGGAGCTCTCC
CATCTGGCCTTGCTGAACGTAAAGACCTGTGAGTCCCTGCCAGATAAATG
TCGCAGCACCGAGAGATTCGCCTACGCCGGCCAGAACAACGCCTTGTTCC
AGTACAGCGGAGCCGAGACAGAGTACACCGATGCGGAAATAATAAAGGAG
GAGATCGAGAACTGGTTTGCTGAGCGCTCGAATGCATCTCCCGAGATCCT
CGCCAGCTTCCCGGAGGAGCTTCCCAACAAAGCGGTGACCAAGTTCACCA
TCGCGGTGGCCGAGAAGAACACCCATGTGGGATGTGCCGCGGTGCGCTTC
TCCCGGGACTTTTACAACCACTTCGTACTCACCTGCAACTTCGCCACATC
GAACATTGTGGGTCAGCCTGTCTACACTCCGGGAGAGAACGCAACCACCG
GCTGCAAGAACCGATATGGAGCTGCCTACGATTACCCCAATCTGTGCTAC
GCCAAGGAGATCTACGACACGAGAACGTCATCGAGACACACAGACGATGG
CAGCTTTCTAGACCAT
FMO14376.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| scpr-A-RA | 873 | CG5207-RA | 13..805 | 9..799 | 3765 | 98.5 | Plus |
| scpr-B-RA | 898 | CG17210-RA | 70..798 | 73..799 | 3340 | 97.4 | Plus |
| scpr-C-RB | 1109 | CG5106-RB | 74..802 | 73..799 | 3295 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:04:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11240141..11240809 | 799..133 | 3110 | 98.4 | Minus |
| 3R | 32079331 | 3R | 11241381..11242052 | 130..799 | 3110 | 98.2 | Plus |
| 3R | 32079331 | 3R | 11225706..11226374 | 133..799 | 3065 | 97.9 | Plus |
| 3R | 32079331 | 3R | 11241195..11241315 | 9..129 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:04:30 has no hits.
FMO14376.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:07:34 Download gff for
FMO14376.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scpr-A-RA | 7..815 | 1..807 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:07:34 Download gff for
FMO14376.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11241189..11241315 | 1..129 | 96 | -> | Plus |
| 3R | 11241381..11242062 | 130..807 | 97 | | Plus |
