FMO14382.5prime Sequence
773 bp (773 high quality bases) assembled on 2015-04-08
> FMO14382.5prime
TCAGTCGACATGTCCTCACGCTACGGTCGAGCTCTAACCATATTCTCGCC
GGATGGCCACCTGTTGCAGGTGGAGTACGCCCAGGAAGCTGTTCGAAAGG
GCTCCACAGCGGTTGGCGTTCGTGGAGCCAATTGTGTGGTGCTGGGTGTG
GAGAAGAGCTCGGTGTCCGAGATGCAGGAGGATCGGACGGTGCGCAAGAT
CAGCATGCTCGATCGCCACGTGGCGTTGGCATTTGCCGGTCTCACGGCCG
ATGCACGGATCCTTATAAATCGAGGGCAGGTCGAGTGCCAGAGCCATCGA
CTCAACTTCGAAAACCAGGTGACCCTCGAGTACATCACCAGATACCTTGC
CCAGCTCAAGCAGAAGTACACGCAGTGCAATGGACGTCGTCCTTTCGGTA
TATCGTGTCTAATAGGAGGCATTGACGCCGATGGCTCTGCACGTCTCTTT
CATACCGAACCATCCGGGATATTCCACGAGTACAAGGCGACCGCCACTGG
GCGTTGGGCAAATACTGTGAGGGAGTTTTTTGAGAAGGCCTATAGCGATC
ATGAAGTGACAACCAAATGTGATGCCATCAAACTAGCCATGCGTGCCCTT
CTCGAAGTAACCCAGATGAGCCAGATGCGCCTGGAGGTGGCCGTATTGGA
GAATGGCAAGCCAATGAAAATGCTGGACAGTGTAGTAATTTCGGAAATAG
TCAAGATCGTTCAGAACGAAAAGGAGCTCCAAGCGAAAGCACATAAATGA
AGAGAGCAAGCTTTCTAGACCAT
FMO14382.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosalpha4T1-RA | 891 | CG17268-RA | 57..803 | 10..755 | 3680 | 99.6 | Plus |
| Prosalpha4-RA | 1176 | CG3422-RA | 149..818 | 10..679 | 1160 | 78.8 | Plus |
| Prosalpha4T2-RB | 1254 | CG4569-RB | 118..562 | 37..481 | 410 | 73.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20748281..20749018 | 747..10 | 3660 | 99.7 | Minus |
| X | 23542271 | X | 16276596..16276826 | 111..341 | 465 | 80.1 | Plus |
| X | 23542271 | X | 16276890..16277229 | 340..679 | 440 | 75.3 | Plus |
| X | 23542271 | X | 16276418..16276521 | 10..113 | 280 | 84.6 | Plus |
| 2R | 25286936 | 2R | 24501794..24501985 | 339..148 | 255 | 75.5 | Minus |
Blast to na_te.dros performed on 2015-04-08 10:04:41 has no hits.
FMO14382.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:07:43 Download gff for
FMO14382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha4T1-RA | 54..809 | 3..763 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:07:43 Download gff for
FMO14382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20748266..20749021 | 3..763 | 98 | | Minus |
