Clone FMO14392 Report

Search the DGRC for FMO14392

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:143
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42790-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14392.5prime Sequence

498 bp (498 high quality bases) assembled on 2015-04-08

> FMO14392.5prime
TCAGTCGACATGCAGCAAGGCAGGAGACCAGGAACCCAGGAAGCAAACTC
CCTGGATGTTGCATGTTCCTGCCGCCAGCAAGGAAATGAAAACGCCCCCA
TGTGTGAGCCAAAAAGCCAACGACCTGGGCAGGGCAGGCACAAACTACAA
AGCGGGGGAAAAAAAAATAAACACACCGGAGTCGGAGGAGTCCTGCCGCA
GAGCAACTATAAAAAGGACACCCTGCAACCGTGTGTACCGGAGTCTCTAT
CGGTGTCAGCCAGCAGCTTACAAAGTCAGACGCATTTGTGTGTGTATCTG
TGTGTGCCGAACGAAGGACGCTCCCAGCTTTTAAGTATAATTTTCCAGAT
ACACAGGCCGAGCACTGGAGTCCAGGTGGCAACTGCTAGACAAAAACGAT
GTGCACGCCCCCACAAAAAACACACACACACACAGAGACAAGAACGTACA
GGAGCAGAAGGACCAGAAGGACCAGCCAGCGCAAGCTTTCTAGACCAT

FMO14392.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:04:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG42790-RB 1416 CG42790-RB 28..498 10..480 2355 100 Plus
CG42790-RC 496 CG42790-RC 28..307 10..289 1400 100 Plus
CG42790-RC 496 CG42790-RC 308..439 349..480 660 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:04:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26784365..26784835 10..480 2355 100 Plus
Blast to na_te.dros performed on 2015-04-08 10:04:59 has no hits.

FMO14392.5prime Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:07:59 Download gff for FMO14392.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42790-RB 22..501 1..484 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:07:59 Download gff for FMO14392.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26784359..26784838 1..484 98   Plus