FMO14396.5prime Sequence
980 bp (934 high quality bases) assembled on 2015-04-08
> FMO14396.5prime
TCAGTCGACATGAGTGGAGAGGAGGAGTACTTCCAGGAGGAGGAAGAAGA
GGAGCAGGAGCAGGATATTTACGACGATGGCACGGAATACACCGAACCGG
GTGCCCAGAAGGTAGACAAGCCGTCAAAGGACGAGAAGAACGTGGCCAAG
TGGCTGAAGAAGAACGTTAAGACGAAGAAGACCAAATTCCTGAGCCACAT
CGTCGAATACTTCACCTCCAGCAAGGCCATCGATGCTCTGCTAAAGTCCA
AATTCACCGAAGGCAGCAATCCGCTTTTCACCACCCGGGAGCAGGTAATC
GAGTTTCTAGACGTGATGCTGGAGCACAAGTTCTTCCATCGCGCCAAGAA
GGTGCCCGTCACTCTGGAGGAGATCAGAGGAAAGTCTGGAGGCGACAAGA
AGGCGGACAAGGAGAAGACCCAAGATAAGGAAAAGGACAAGGCAAAGGAT
GAGAAGAAGGATACCGATCCGGAAGGCGATAATGGCCAAGGAGACGGAGG
TGCGTCTGGCAACGAAAAAGAGAAGGAGAAAAAGGAGAAGAAAAAGCGCA
AGATCCGCCTGGACATGCATCCTGAGCAGATCTTCGTGGACGGCTCCGAG
GCATACGTCTGGATCTACGATCCCATACCGCTCCACTACTGGATATTCGG
CTTCATCCTGCTACTTGGCGCCGTTGGCATTTGCCTATTCCCTCTGTGGC
CTCCACTGCTACGCAAGGGTGTCTACTACTTGTCCATTGCGGCTGCCGGC
TTCCTTGTTTTCATCCTGGCTCTGACAATTGTACGTCTAATTGTGTTCAT
CATCGTGTGGGCATTAACCGGCGGCAAGTTGCACTTCTGGATCTTCCCCA
ACCTGACTGAGATGTGAGCTTCTTCGCCTCCTTCTGGCAACTATATGAGA
GTACTATAACAGTGGACCCAAATAATTCGTCCGCCAAGATCCGACAAGAT
ATCGAATTCGAAGACCAAGAAGAAGGGAAA
FMO14396.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trp1-RC | 1532 | CG4758-RC | 130..1100 | 10..980 | 4660 | 98.9 | Plus |
| Trp1-RB | 2093 | CG4758-RB | 130..1100 | 10..980 | 4660 | 98.9 | Plus |
| Trp1-RD | 1484 | CG4758-RD | 157..1052 | 85..980 | 4285 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-08 10:05:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10010736..10011552 | 84..899 | 4020 | 99.8 | Plus |
| 2L | 23513712 | 2L | 10010483..10010558 | 10..85 | 380 | 100 | Plus |
| 2L | 23513712 | 2L | 10011611..10011686 | 903..980 | 215 | 91 | Plus |
Blast to na_te.dros performed on 2015-04-08 10:05:04 has no hits.
FMO14396.5prime Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-08 10:08:04 Download gff for
FMO14396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trp1-RC | 123..1096 | 1..977 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-08 10:08:04 Download gff for
FMO14396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10010476..10010557 | 1..84 | 95 | -> | Plus |
| 2L | 10010737..10011552 | 85..899 | 99 | -> | Plus |
