BDGP Sequence Production Resources |
Search the DGRC for GH01072
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 10 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | MED11-RA |
Protein status: | GH01072.pep: gold |
Preliminary Size: | 884 |
Sequenced Size: | 723 |
Gene | Date | Evidence |
---|---|---|
CG6884 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6884 | 2002-05-01 | Blastp of sequenced clone |
CG6884 | 2003-01-01 | Sim4 clustering to Release 3 |
MED11 | 2008-04-29 | Release 5.5 accounting |
MED11 | 2008-08-15 | Release 5.9 accounting |
MED11 | 2008-12-18 | 5.12 accounting |
723 bp (723 high quality bases) assembled on 2002-05-01
GenBank Submission: AY102649
> GH01072.complete AATGAATCCTCTGGACAAAATACACGCTCTAGATGAGATCGAAAAGGAGA TAATCCTGTGCATGCAAAGTGCAGGACAAGCCTTGCAGGAGTTGGGCAAG GAAAAGTCTTCCCAGAAAAATGCGGAGACCCAGTCGCAGCAGTTTCTCAA GAGTCTGTCCAGCGTGGAATCGAAGCTGTCCGAGCAGATCAACTACTTGA CCCAGGTGTCCACGGGTCAGCCACACGAGGGTTCCGGCTATGCATCCGCC AAAGTGCTCCAAATGGCTTGGCATCGCATTCAGCACGCTAGGTCCAGAGT GCGTGAACTTGAGGAAACTAAGGCCAAACACTCACATGCAGCTCGTCAGC AGTTGAAGCGTCAGCAGGAACATGCCGCCGCCCAGCAACAGCAGCAGCAA CAACAACAGCAGCAGCAGCAACAACAACAGATGCAACAGGCGGCACAACA GCAGCAACAACAAACCGGAGGAGGAAATGCCGGCAGCGGAGATCATCCCA TGGGCGGAGACTCCTCAATGTCAACCAACTAATCTTGCGCTATCTTTAAG GGTAAGGGTTTTAAATTTTTTAGAGTGCATTCCGAAAAGGCACATTTTGT CAACCAATTGCGTTAATCGAAACATAAGTGACACTCTTTTTAAGAAATAC ATTTGCATACTACTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED11-RA | 809 | MED11-RA | 143..809 | 1..667 | 3335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18735529..18735602 | 1..74 | 100 | -> | Plus |
chr3L | 18735658..18735964 | 75..381 | 99 | == | Plus |
chr3L | 18736049..18736253 | 463..667 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..531 | 2..532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..531 | 2..532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..531 | 2..532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..531 | 2..532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..531 | 2..532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..662 | 1..662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..662 | 1..662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 47..713 | 1..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 1..662 | 1..662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED11-RA | 47..713 | 1..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18745902..18745975 | 1..74 | 100 | -> | Plus |
3L | 18746031..18746623 | 75..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18745902..18745975 | 1..74 | 100 | -> | Plus |
3L | 18746031..18746623 | 75..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18745902..18745975 | 1..74 | 100 | -> | Plus |
3L | 18746031..18746623 | 75..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18739002..18739075 | 1..74 | 100 | -> | Plus |
arm_3L | 18739131..18739723 | 75..667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18739131..18739723 | 75..667 | 100 | Plus | |
3L | 18739002..18739075 | 1..74 | 100 | -> | Plus |
Translation from 1 to 531
> GH01072.hyp MNPLDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLK SLSSVESKLSEQINYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRV RELEETKAKHSHAARQQLKRQQEHAAAQQQQQQQQQQQQQQQQMQQAAQQ QQQQTGGGNAGSGDHPMGGDSSMSTN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED11-PA | 176 | CG6884-PA | 1..176 | 1..176 | 889 | 100 | Plus |
btd-PA | 644 | CG12653-PA | 18..89 | 83..154 | 153 | 50.7 | Plus |
psq-PK | 639 | CG2368-PK | 56..186 | 55..169 | 151 | 35 | Plus |
psq-PJ | 639 | CG2368-PJ | 56..186 | 55..169 | 151 | 35 | Plus |
psq-PF | 645 | CG2368-PF | 62..192 | 55..169 | 151 | 35 | Plus |
Translation from 1 to 531
> GH01072.pep MNPLDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLK SLSSVESKLSEQINYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRV RELEETKAKHSHAARQQLKRQQEHAAAQQQQQQQQQQQQQQQQMQQAAQQ QQQQTGGGNAGSGDHPMGGDSSMSTN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23639-PA | 179 | GF23639-PA | 1..179 | 1..176 | 625 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13675-PA | 174 | GG13675-PA | 1..174 | 1..176 | 846 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14372-PA | 183 | GH14372-PA | 1..112 | 1..112 | 580 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED11-PA | 176 | CG6884-PA | 1..176 | 1..176 | 889 | 100 | Plus |
btd-PA | 644 | CG12653-PA | 18..89 | 83..154 | 153 | 50.7 | Plus |
psq-PK | 639 | CG2368-PK | 56..186 | 55..169 | 151 | 35 | Plus |
psq-PJ | 639 | CG2368-PJ | 56..186 | 55..169 | 151 | 35 | Plus |
psq-PF | 645 | CG2368-PF | 62..192 | 55..169 | 151 | 35 | Plus |
psq-PG | 645 | CG2368-PG | 62..192 | 55..169 | 151 | 35 | Plus |
psq-PD | 645 | CG2368-PD | 62..192 | 55..169 | 151 | 35 | Plus |
psq-PH | 645 | CG2368-PH | 62..192 | 55..169 | 151 | 35 | Plus |
psq-PE | 645 | CG2368-PE | 62..192 | 55..169 | 151 | 35 | Plus |
psq-PN | 1043 | CG2368-PN | 481..611 | 55..169 | 151 | 35 | Plus |
psq-PA | 1046 | CG2368-PA | 481..611 | 55..169 | 151 | 35 | Plus |
psq-PB | 1064 | CG2368-PB | 481..611 | 55..169 | 151 | 35 | Plus |
psq-PC | 1064 | CG2368-PC | 481..611 | 55..169 | 151 | 35 | Plus |
psq-PM | 1123 | CG2368-PM | 481..611 | 55..169 | 151 | 35 | Plus |
Tomosyn-PJ | 1254 | CG17762-PJ | 688..748 | 113..175 | 151 | 54 | Plus |
Tomosyn-PH | 1254 | CG17762-PH | 688..748 | 113..175 | 151 | 54 | Plus |
Tomosyn-PL | 1387 | CG17762-PL | 688..748 | 113..175 | 151 | 54 | Plus |
Tomosyn-PK | 1387 | CG17762-PK | 688..748 | 113..175 | 151 | 54 | Plus |
Smr-PF | 3601 | CG4013-PF | 133..269 | 22..175 | 151 | 30.3 | Plus |
Smr-PE | 3601 | CG4013-PE | 133..269 | 22..175 | 151 | 30.3 | Plus |
Smr-PD | 3601 | CG4013-PD | 133..269 | 22..175 | 151 | 30.3 | Plus |
Ptip-PA | 2294 | CG32133-PA | 201..260 | 94..153 | 149 | 50 | Plus |
Smr-PG | 3607 | CG4013-PG | 134..275 | 33..175 | 148 | 29.6 | Plus |
ASPP-PA | 1020 | CG18375-PA | 102..255 | 2..154 | 146 | 32.7 | Plus |
ASPP-PC | 1046 | CG18375-PC | 102..255 | 2..154 | 146 | 32.7 | Plus |
ASPP-PB | 1069 | CG18375-PB | 151..304 | 2..154 | 146 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11315-PA | 181 | GI11315-PA | 1..114 | 1..114 | 588 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24880-PA | 181 | GL24880-PA | 1..181 | 1..176 | 599 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19929-PA | 181 | GA19929-PA | 1..181 | 1..176 | 599 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14990-PA | 190 | GM14990-PA | 1..126 | 1..127 | 542 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14767-PA | 176 | GD14767-PA | 1..176 | 1..176 | 880 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11572-PA | 189 | GJ11572-PA | 1..124 | 1..124 | 583 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12088-PA | 207 | GK12088-PA | 1..124 | 1..124 | 595 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19972-PA | 176 | GE19972-PA | 1..176 | 1..176 | 862 | 97.7 | Plus |