Clone GH01188 Report

Search the DGRC for GH01188

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:11
Well:88
Vector:pOT2
Associated Gene/TranscriptCG5886-RA
Protein status:GH01188.pep: gold
Preliminary Size:1843
Sequenced Size:1841

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5886 2001-01-01 Release 2 assignment
CG5886 2001-07-04 Blastp of sequenced clone
CG5886 2003-01-01 Sim4 clustering to Release 3
CG5886 2008-04-29 Release 5.5 accounting
CG5886 2008-08-15 Release 5.9 accounting
CG5886 2008-12-18 5.12 accounting

Clone Sequence Records

GH01188.complete Sequence

1841 bp (1841 high quality bases) assembled on 2001-07-04

GenBank Submission: AY047502

> GH01188.complete
TTAAATATAGCACCGATTTTTGAATAGACCATGGAGAAGCTAAGCAAGGC
GAAAAAAGTGGCGCGCGAGGAGAAGCAGCGCGACCAGAAGTTGGAGGAGT
TGGTCATGAAATCCCTTGACGAATGCCCCTCCGCCGAGGAGAAGGTGAAA
CTTCTGCTGCAACGCCATGTGGACAGCGAAAAGAATGTAAGCCGGCTGAC
GGCGGAACTGCGTGTCCTGCAGCGCCAAATGGAGTCGCAGCAGAGGGAGA
AGGAGCAGGTTCAGCGGGATCTTAACAAGAGCGTCCTGATGCGAGACAAG
CTGCAGGAGGTGTGCCGCGAACAGCAGCGCATCATAAAGTCCGTAAAGAA
CGAGAGCCTGCTGCAAATCAAAGTGGAGGAGGAGCGGCGCAAGGAGAGCC
AGACAAAGTTCCAAAGCTCCCTGAACGATGTCCAAAAGTCGCTGGCCAAG
AACAACGAGGAGAACATCAAGCTGCGCGATTACAACATCGAGATGACCAA
GAAGTTAAAGCTGCTGGCCGAGCAGTACCAAACGAGGGAGCAGCACCTGG
AGAAGCTCAATGAACAGGTTCAGTTGGAGGCCCAGCTGCACCAGGCCAAG
CTGCAAAAATGCCAGGTGGAGGCTGCCATGGAAAAGGAGATATTGAGCAA
GGAAAACCAGATTGGCCTGGAGAAACTGATGCAAGCGCAACGTGCCATAA
AGGATCTCACCGATCGGGAGCACCAACTGAAGGAGCAACTGAACATATAC
ACCGCCAAGTACGATGACTTCCAGCAGTCGCTGCAGAAGTCCAATGAGGT
TTTCGGCAGCTACAAGGTGGAGCTTGAGAAGATGTCCAAGCACACTAAGA
AGATCGAGAAGGAGGCGCTGGGCTGGCGGCAAAAGTACGAGAAAGCTAAT
GCCATGGTGATCGATTTAGCCACAGAAAAGAGTCTGCAGACGCAGCACTC
AGAGCGCCTGCAGAAGCAAATACAGCAGCTGCAGAAGCTACTGCGTGCTC
TACAGCTGGAGAGGACAACACTGCACAAGTGCCTGCGGGATCACGAGATC
GAAATACCCGCCCTGCCGCAGTTGCCTCCTGAACCAGAGCCAGTAAACGT
CAAGCCAGTTAGTGCTGAAAATGTTAAAATGGAAATGATGTCTCGCAATT
GTGCGGAACTGAAGCAAACATTGGCAAATCTGCAGAACCAAATGAAGCTG
CTAACGACGAATGAATCGAAGACTTCCATTGAGGAAAAGAAGAAGGCCGA
GGAGCAGCGTCAGGCGAACAATGCCAAGAAGAATATACGCAAGAAGGAGA
AAAAGTCCAAGGCAAAGGCAGCAGCTGCAGCGGCGGCGGAAGCTGCAGCA
TCCACAACGAACGGTGAGGCGAACGGCGTTCAGGAATCAGCCGCAACGGA
GTCAAAGGCCGAGCTAGAGGCAGCGGGTGATGCCTCAAACGTTAAGAACG
AAAAGGAGCAGACCGTTGACATTGCGACAGACACCCAGGAGCTCGTAGGT
GATGGCGACGCTATCACCGCAAAGTCACTTGTTGATATATCCGAAGTGCC
TCCCCTAATCGATGCCAATGCCAACTAAACTACTGACTGTTCGCCTATAG
TCCCATCTCCAAATCTCGGGCGGCCACCAAGCCTTCCCTGCAAAGCATTT
TGTGTCATCCATGTCTCAACTGAAAAACGTCATCAATTACAAACCTACAT
GGTCCGAATTTTGTACTAGTTATTTATTGTACTTTGTATATTGTATTTAT
TTAAAGGATGTCGTCGGTGATCGTGTATTGCTGTTCAACAACAAATTGAG
TAAAACGTGTTTCCTGCAAACAGAAAAAAAAAAAAAAAAAA

GH01188.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:38:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG5886-RA 1982 CG5886-RA 112..1936 1..1825 9125 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21675785..21676957 651..1823 5730 99.2 Plus
chr3R 27901430 chr3R 21674887..21675290 102..505 2020 100 Plus
chr3R 27901430 chr3R 21675396..21675543 504..651 725 99.3 Plus
chr3R 27901430 chr3R 21674671..21674774 1..104 520 100 Plus
chrYHet 347003 chrYHet 205225..205369 355..208 435 87.8 Minus
chr3L 24539361 chr3L 23304578..23304683 343..238 290 84.9 Minus
chr3L 24539361 chr3L 23304433..23304491 725..667 190 88.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:25:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25852817..25853991 651..1825 5875 100 Plus
3R 32079331 3R 25851919..25852322 102..505 2020 100 Plus
3R 32079331 3R 25852428..25852575 504..651 740 100 Plus
3R 32079331 3R 25851703..25851806 1..104 520 100 Plus
Y 3667352 Y 1457593..1457737 208..355 435 87.8 Plus
Y 3667352 Y 1883828..1883972 355..208 435 87.8 Minus
Y 3667352 Y 1888797..1888941 355..208 435 87.8 Minus
3L 28110227 3L 23315659..23315764 343..238 290 84.9 Minus
3L 28110227 3L 23315514..23315572 725..667 190 88.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25593648..25594822 651..1825 5875 100 Plus
3R 31820162 3R 25592750..25593153 102..505 2020 100 Plus
3R 31820162 3R 25593259..25593406 504..651 740 100 Plus
3R 31820162 3R 25592534..25592637 1..104 520 100 Plus
Y 3410481 Y 1363660..1363804 208..355 445 87.8 Plus
Y 3410481 Y 1987906..1988050 355..208 445 87.8 Minus
Y 3410481 Y 1982937..1983081 355..208 445 87.8 Minus
3L 28103327 3L 23308759..23308864 343..238 290 84.9 Minus
3L 28103327 3L 23308614..23308672 725..667 190 88.1 Minus
3L 28103327 3L 23308864..23308928 200..136 175 84.6 Minus
Blast to na_te.dros performed on 2019-03-16 14:56:56 has no hits.

GH01188.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:58:15 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21674671..21674772 1..102 100 -> Plus
chr3R 21674888..21675288 103..503 100 -> Plus
chr3R 21675396..21675542 504..650 99 -> Plus
chr3R 21675785..21676957 651..1823 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:02:46 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 1..1548 31..1578 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:30:29 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 1..1548 31..1578 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:02:35 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 1..1548 31..1578 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:03:59 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 1..1548 31..1578 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:34:54 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 1..1548 31..1578 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:31:20 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 50..1872 1..1823 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:30:29 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 50..1872 1..1823 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:35 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 72..1894 1..1823 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:03:59 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 50..1872 1..1823 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:34:54 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
CG5886-RA 72..1894 1..1823 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:58:15 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25851703..25851804 1..102 100 -> Plus
3R 25851920..25852320 103..503 100 -> Plus
3R 25852428..25852574 504..650 100 -> Plus
3R 25852817..25853989 651..1823 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:58:15 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25851703..25851804 1..102 100 -> Plus
3R 25851920..25852320 103..503 100 -> Plus
3R 25852428..25852574 504..650 100 -> Plus
3R 25852817..25853989 651..1823 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:58:15 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25851703..25851804 1..102 100 -> Plus
3R 25851920..25852320 103..503 100 -> Plus
3R 25852428..25852574 504..650 100 -> Plus
3R 25852817..25853989 651..1823 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:35 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21677642..21678042 103..503 100 -> Plus
arm_3R 21678150..21678296 504..650 100 -> Plus
arm_3R 21677425..21677526 1..102 100 -> Plus
arm_3R 21678539..21679711 651..1823 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:42:06 Download gff for GH01188.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25593259..25593405 504..650 100 -> Plus
3R 25592751..25593151 103..503 100 -> Plus
3R 25593648..25594820 651..1823 100   Plus
3R 25592534..25592635 1..102 100 -> Plus

GH01188.pep Sequence

Translation from 30 to 1577

> GH01188.pep
MEKLSKAKKVAREEKQRDQKLEELVMKSLDECPSAEEKVKLLLQRHVDSE
KNVSRLTAELRVLQRQMESQQREKEQVQRDLNKSVLMRDKLQEVCREQQR
IIKSVKNESLLQIKVEEERRKESQTKFQSSLNDVQKSLAKNNEENIKLRD
YNIEMTKKLKLLAEQYQTREQHLEKLNEQVQLEAQLHQAKLQKCQVEAAM
EKEILSKENQIGLEKLMQAQRAIKDLTDREHQLKEQLNIYTAKYDDFQQS
LQKSNEVFGSYKVELEKMSKHTKKIEKEALGWRQKYEKANAMVIDLATEK
SLQTQHSERLQKQIQQLQKLLRALQLERTTLHKCLRDHEIEIPALPQLPP
EPEPVNVKPVSAENVKMEMMSRNCAELKQTLANLQNQMKLLTTNESKTSI
EEKKKAEEQRQANNAKKNIRKKEKKSKAKAAAAAAAEAAASTTNGEANGV
QESAATESKAELEAAGDASNVKNEKEQTVDIATDTQELVGDGDAITAKSL
VDISEVPPLIDANAN*

GH01188.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:58:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16776-PA 509 GF16776-PA 17..508 16..514 1782 83 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11428-PA 515 GG11428-PA 1..515 1..515 2555 96.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:58:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22303-PA 510 GH22303-PA 1..396 1..397 1680 81.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG5886-PA 515 CG5886-PA 1..515 1..515 2534 100 Plus
CLIP-190-PN 1598 CG5020-PN 519..999 1..506 217 21 Plus
CLIP-190-PR 1601 CG5020-PR 522..1002 1..506 217 21 Plus
CLIP-190-PP 1623 CG5020-PP 544..1024 1..506 217 21 Plus
CLIP-190-PC 1652 CG5020-PC 573..1053 1..506 217 21 Plus
CLIP-190-PS 1653 CG5020-PS 574..1054 1..506 217 21 Plus
CLIP-190-PM 1668 CG5020-PM 589..1069 1..506 217 21 Plus
CLIP-190-PB 1689 CG5020-PB 610..1090 1..506 217 21 Plus
CLIP-190-PA 1690 CG5020-PA 611..1091 1..506 217 21 Plus
rudhira-PE 2075 CG43154-PE 1405..1753 1..371 207 26.4 Plus
rudhira-PC 2075 CG43154-PC 1405..1753 1..371 207 26.4 Plus
Golgin245-PA 1489 CG3493-PA 927..1370 16..464 204 21.8 Plus
mud-PG 1933 CG12047-PG 1094..1567 6..441 204 23.7 Plus
mud-PI 2113 CG12047-PI 1094..1567 6..441 204 23.7 Plus
mud-PJ 2165 CG12047-PJ 1094..1567 6..441 204 23.7 Plus
mud-PF 2394 CG12047-PF 1094..1567 6..441 204 23.7 Plus
mud-PH 2567 CG12047-PH 1094..1567 6..441 204 23.7 Plus
CLIP-190-PR 1601 CG5020-PR 280..792 7..486 203 19.9 Plus
CLIP-190-PN 1598 CG5020-PN 282..789 12..486 199 19.9 Plus
CLIP-190-PP 1623 CG5020-PP 307..814 12..486 199 19.9 Plus
CLIP-190-PC 1652 CG5020-PC 336..843 12..486 199 19.9 Plus
CLIP-190-PM 1668 CG5020-PM 352..859 12..486 199 19.9 Plus
CLIP-190-PB 1689 CG5020-PB 373..880 12..486 199 19.9 Plus
CLIP-190-PA 1690 CG5020-PA 374..881 12..486 199 19.9 Plus
mud-PG 1933 CG12047-PG 1233..1671 14..502 194 23.1 Plus
mud-PI 2113 CG12047-PI 1233..1671 14..502 194 23.1 Plus
mud-PJ 2165 CG12047-PJ 1233..1671 14..502 194 23.1 Plus
mud-PF 2394 CG12047-PF 1233..1671 14..502 194 23.1 Plus
mud-PH 2567 CG12047-PH 1233..1671 14..502 194 23.1 Plus
mud-PK 1912 CG12047-PK 1094..1651 6..502 189 22.9 Plus
brp-PI 1397 CG42344-PI 837..1343 5..489 184 18.4 Plus
brp-PM 1498 CG42344-PM 938..1444 5..489 184 18.4 Plus
brp-PK 1707 CG42344-PK 1147..1653 5..489 184 18.4 Plus
brp-PH 1740 CG42344-PH 1180..1686 5..489 184 18.4 Plus
brp-PE 1740 CG42344-PE 1180..1686 5..489 184 18.4 Plus
brp-PD 1740 CG42344-PD 1180..1686 5..489 184 18.4 Plus
brp-PL 1781 CG42344-PL 1221..1727 5..489 184 18.4 Plus
brp-PG 1786 CG42344-PG 1226..1732 5..489 184 18.4 Plus
brp-PJ 2238 CG42344-PJ 1678..2184 5..489 184 18.4 Plus
rudhira-PE 2075 CG43154-PE 1256..1661 8..435 183 22.9 Plus
rudhira-PC 2075 CG43154-PC 1256..1661 8..435 183 22.9 Plus
Strn-Mlck-PT 7905 CG44162-PT 3916..4440 14..502 183 20.4 Plus
Strn-Mlck-PT 7905 CG44162-PT 4696..5223 14..498 183 22.7 Plus
Strn-Mlck-PV 7944 CG44162-PV 3955..4479 14..502 183 20.4 Plus
Strn-Mlck-PV 7944 CG44162-PV 4735..5262 14..498 183 22.7 Plus
Strn-Mlck-PS 8216 CG44162-PS 3916..4440 14..502 183 20.4 Plus
Strn-Mlck-PS 8216 CG44162-PS 4696..5223 14..498 183 22.7 Plus
Strn-Mlck-PU 8255 CG44162-PU 3955..4479 14..502 183 20.4 Plus
Strn-Mlck-PU 8255 CG44162-PU 4735..5262 14..498 183 22.7 Plus
mud-PL 2501 CG12047-PL 1094..1609 6..502 182 22.7 Plus
brp-PH 1740 CG42344-PH 155..643 14..476 179 21 Plus
brp-PE 1740 CG42344-PE 155..643 14..476 179 21 Plus
brp-PD 1740 CG42344-PD 155..643 14..476 179 21 Plus
brp-PG 1786 CG42344-PG 201..689 14..476 179 21 Plus
zip-PH 1964 CG15792-PH 1344..1871 1..488 178 19.7 Plus
zip-PG 1971 CG15792-PG 1336..1863 1..488 178 19.7 Plus
zip-PE 1971 CG15792-PE 1336..1863 1..488 178 19.7 Plus
zip-PC 1971 CG15792-PC 1336..1863 1..488 178 19.7 Plus
zip-PF 1979 CG15792-PF 1344..1871 1..488 178 19.7 Plus
zip-PB 2011 CG15792-PB 1376..1903 1..488 178 19.7 Plus
zip-PD 2016 CG15792-PD 1381..1908 1..488 178 19.7 Plus
zip-PI 2024 CG15792-PI 1389..1916 1..488 178 19.7 Plus
zip-PA 2056 CG15792-PA 1421..1948 1..488 178 19.7 Plus
zip-PH 1964 CG15792-PH 872..1330 2..489 177 22.4 Plus
zip-PG 1971 CG15792-PG 864..1322 2..489 177 22.4 Plus
zip-PE 1971 CG15792-PE 864..1322 2..489 177 22.4 Plus
zip-PC 1971 CG15792-PC 864..1322 2..489 177 22.4 Plus
zip-PF 1979 CG15792-PF 872..1330 2..489 177 22.4 Plus
zip-PB 2011 CG15792-PB 904..1362 2..489 177 22.4 Plus
zip-PD 2016 CG15792-PD 909..1367 2..489 177 22.4 Plus
zip-PI 2024 CG15792-PI 917..1375 2..489 177 22.4 Plus
zip-PA 2056 CG15792-PA 949..1407 2..489 177 22.4 Plus
mud-PG 1933 CG12047-PG 1023..1456 20..480 176 20.3 Plus
mud-PI 2113 CG12047-PI 1023..1456 20..480 176 20.3 Plus
mud-PJ 2165 CG12047-PJ 1023..1456 20..480 176 20.3 Plus
mud-PF 2394 CG12047-PF 1023..1456 20..480 176 20.3 Plus
mud-PH 2567 CG12047-PH 1023..1456 20..480 176 20.3 Plus
mud-PK 1912 CG12047-PK 1055..1547 3..441 176 22.6 Plus
zip-PH 1964 CG15792-PH 906..1398 1..487 176 18 Plus
zip-PG 1971 CG15792-PG 898..1390 1..487 176 18 Plus
zip-PE 1971 CG15792-PE 898..1390 1..487 176 18 Plus
zip-PC 1971 CG15792-PC 898..1390 1..487 176 18 Plus
zip-PF 1979 CG15792-PF 906..1398 1..487 176 18 Plus
zip-PB 2011 CG15792-PB 938..1430 1..487 176 18 Plus
zip-PD 2016 CG15792-PD 943..1435 1..487 176 18 Plus
zip-PI 2024 CG15792-PI 951..1443 1..487 176 18 Plus
zip-PA 2056 CG15792-PA 983..1475 1..487 176 18 Plus
rgn-PD 800 CG6014-PD 364..785 8..429 175 20.3 Plus
rgn-PA 800 CG6014-PA 364..785 8..429 175 20.3 Plus
rgn-PC 808 CG6014-PC 372..793 8..429 175 20.3 Plus
rgn-PB 808 CG6014-PB 372..793 8..429 175 20.3 Plus
Strn-Mlck-PT 7905 CG44162-PT 3466..3985 2..502 174 20.9 Plus
Strn-Mlck-PV 7944 CG44162-PV 3505..4024 2..502 174 20.9 Plus
Strn-Mlck-PS 8216 CG44162-PS 3466..3985 2..502 174 20.9 Plus
Strn-Mlck-PU 8255 CG44162-PU 3505..4024 2..502 174 20.9 Plus
Mhc-PU 1949 CG17927-PU 1169..1658 3..487 174 21.8 Plus
Mhc-PN 1949 CG17927-PN 1169..1658 3..487 174 21.8 Plus
Mhc-PE 1962 CG17927-PE 1169..1658 3..487 174 21.8 Plus
Mhc-PH 1962 CG17927-PH 1169..1658 3..487 174 21.8 Plus
Mhc-PT 1962 CG17927-PT 1169..1658 3..487 174 21.8 Plus
Mhc-PO 1962 CG17927-PO 1169..1658 3..487 174 21.8 Plus
brp-PK 1707 CG42344-PK 201..673 14..476 173 21.5 Plus
rgn-PD 800 CG6014-PD 326..743 40..463 173 23.5 Plus
rgn-PA 800 CG6014-PA 326..743 40..463 173 23.5 Plus
rgn-PC 808 CG6014-PC 334..751 40..463 173 23.5 Plus
rgn-PB 808 CG6014-PB 334..751 40..463 173 23.5 Plus
brp-PM 1498 CG42344-PM 155..593 14..423 171 21.5 Plus
CLIP-190-PS 1653 CG5020-PS 370..844 55..486 170 20.1 Plus
Strn-Mlck-PT 7905 CG44162-PT 4513..5043 8..508 170 20.2 Plus
Strn-Mlck-PV 7944 CG44162-PV 4552..5082 8..508 170 20.2 Plus
Strn-Mlck-PS 8216 CG44162-PS 4513..5043 8..508 170 20.2 Plus
Strn-Mlck-PU 8255 CG44162-PU 4552..5082 8..508 170 20.2 Plus
mud-PL 2501 CG12047-PL 1055..1505 3..441 170 21.7 Plus
Mhc-PU 1949 CG17927-PU 934..1449 3..480 170 20.6 Plus
Mhc-PN 1949 CG17927-PN 934..1449 3..480 170 20.6 Plus
Mhc-PE 1962 CG17927-PE 934..1449 3..480 170 20.6 Plus
Mhc-PH 1962 CG17927-PH 934..1449 3..480 170 20.6 Plus
Mhc-PT 1962 CG17927-PT 934..1449 3..480 170 20.6 Plus
Mhc-PO 1962 CG17927-PO 934..1449 3..480 170 20.6 Plus
Golgin245-PA 1489 CG3493-PA 428..877 11..506 169 19.5 Plus
Strn-Mlck-PT 7905 CG44162-PT 3439..3920 37..502 169 21.6 Plus
Strn-Mlck-PV 7944 CG44162-PV 3478..3959 37..502 169 21.6 Plus
Strn-Mlck-PS 8216 CG44162-PS 3439..3920 37..502 169 21.6 Plus
Strn-Mlck-PU 8255 CG44162-PU 3478..3959 37..502 169 21.6 Plus
mud-PL 2501 CG12047-PL 1023..1463 20..441 167 19.6 Plus
Strn-Mlck-PT 7905 CG44162-PT 4058..4570 8..502 166 19.5 Plus
Strn-Mlck-PV 7944 CG44162-PV 4097..4609 8..502 166 19.5 Plus
Strn-Mlck-PS 8216 CG44162-PS 4058..4570 8..502 166 19.5 Plus
Strn-Mlck-PU 8255 CG44162-PU 4097..4609 8..502 166 19.5 Plus
zip-PH 1964 CG15792-PH 1001..1530 8..493 166 17.8 Plus
zip-PG 1971 CG15792-PG 993..1522 8..493 166 17.8 Plus
zip-PE 1971 CG15792-PE 993..1522 8..493 166 17.8 Plus
zip-PC 1971 CG15792-PC 993..1522 8..493 166 17.8 Plus
zip-PF 1979 CG15792-PF 1001..1530 8..493 166 17.8 Plus
zip-PB 2011 CG15792-PB 1033..1562 8..493 166 17.8 Plus
zip-PD 2016 CG15792-PD 1038..1567 8..493 166 17.8 Plus
zip-PI 2024 CG15792-PI 1046..1575 8..493 166 17.8 Plus
zip-PA 2056 CG15792-PA 1078..1607 8..493 166 17.8 Plus
CLIP-190-PN 1598 CG5020-PN 914..1394 2..484 165 18.2 Plus
CLIP-190-PR 1601 CG5020-PR 917..1397 2..484 165 18.2 Plus
CLIP-190-PP 1623 CG5020-PP 939..1419 2..484 165 18.2 Plus
CLIP-190-PC 1652 CG5020-PC 968..1448 2..484 165 18.2 Plus
CLIP-190-PS 1653 CG5020-PS 969..1449 2..484 165 18.2 Plus
CLIP-190-PM 1668 CG5020-PM 984..1464 2..484 165 18.2 Plus
CLIP-190-PB 1689 CG5020-PB 1005..1485 2..484 165 18.2 Plus
CLIP-190-PA 1690 CG5020-PA 1006..1486 2..484 165 18.2 Plus
mud-PK 1912 CG12047-PK 1023..1467 20..486 165 20 Plus
Mhc-PU 1949 CG17927-PU 1381..1826 17..493 164 22.8 Plus
Mhc-PN 1949 CG17927-PN 1381..1826 17..493 164 22.8 Plus
Mhc-PE 1962 CG17927-PE 1381..1826 17..493 164 22.8 Plus
Mhc-PH 1962 CG17927-PH 1381..1826 17..493 164 22.8 Plus
Mhc-PT 1962 CG17927-PT 1381..1826 17..493 164 22.8 Plus
Mhc-PO 1962 CG17927-PO 1381..1826 17..493 164 22.8 Plus
Strn-Mlck-PT 7905 CG44162-PT 3981..4505 14..502 163 21.2 Plus
Strn-Mlck-PV 7944 CG44162-PV 4020..4544 14..502 163 21.2 Plus
Strn-Mlck-PS 8216 CG44162-PS 3981..4505 14..502 163 21.2 Plus
Strn-Mlck-PU 8255 CG44162-PU 4020..4544 14..502 163 21.2 Plus
Strn-Mlck-PT 7905 CG44162-PT 4448..4942 8..484 159 21.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 4487..4981 8..484 159 21.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 4448..4942 8..484 159 21.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 4487..4981 8..484 159 21.1 Plus
Strn-Mlck-PT 7905 CG44162-PT 4589..5076 2..486 158 20 Plus
Strn-Mlck-PV 7944 CG44162-PV 4628..5115 2..486 158 20 Plus
Strn-Mlck-PS 8216 CG44162-PS 4589..5076 2..486 158 20 Plus
Strn-Mlck-PU 8255 CG44162-PU 4628..5115 2..486 158 20 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:58:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22973-PA 548 GI22973-PA 1..412 1..409 1686 79.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:58:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21538-PA 540 GL21538-PA 1..540 1..513 1624 69.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:58:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19203-PA 540 GA19203-PA 1..540 1..513 1631 69.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:58:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10269-PA 515 GM10269-PA 1..515 1..515 2598 98.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:58:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21238-PA 515 GD21238-PA 1..515 1..515 2594 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22733-PA 535 GJ22733-PA 1..412 1..409 1688 80.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:58:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12861-PA 538 GK12861-PA 1..538 1..515 1691 67.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:58:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23623-PA 515 GE23623-PA 1..515 1..515 2567 96.9 Plus

GH01188.hyp Sequence

Translation from 30 to 1577

> GH01188.hyp
MEKLSKAKKVAREEKQRDQKLEELVMKSLDECPSAEEKVKLLLQRHVDSE
KNVSRLTAELRVLQRQMESQQREKEQVQRDLNKSVLMRDKLQEVCREQQR
IIKSVKNESLLQIKVEEERRKESQTKFQSSLNDVQKSLAKNNEENIKLRD
YNIEMTKKLKLLAEQYQTREQHLEKLNEQVQLEAQLHQAKLQKCQVEAAM
EKEILSKENQIGLEKLMQAQRAIKDLTDREHQLKEQLNIYTAKYDDFQQS
LQKSNEVFGSYKVELEKMSKHTKKIEKEALGWRQKYEKANAMVIDLATEK
SLQTQHSERLQKQIQQLQKLLRALQLERTTLHKCLRDHEIEIPALPQLPP
EPEPVNVKPVSAENVKMEMMSRNCAELKQTLANLQNQMKLLTTNESKTSI
EEKKKAEEQRQANNAKKNIRKKEKKSKAKAAAAAAAEAAASTTNGEANGV
QESAATESKAELEAAGDASNVKNEKEQTVDIATDTQELVGDGDAITAKSL
VDISEVPPLIDANAN*

GH01188.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG5886-PA 515 CG5886-PA 1..515 1..515 2534 100 Plus
CLIP-190-PN 1598 CG5020-PN 519..999 1..506 217 21 Plus
CLIP-190-PR 1601 CG5020-PR 522..1002 1..506 217 21 Plus
CLIP-190-PP 1623 CG5020-PP 544..1024 1..506 217 21 Plus
CLIP-190-PC 1652 CG5020-PC 573..1053 1..506 217 21 Plus
CLIP-190-PR 1601 CG5020-PR 280..792 7..486 203 19.9 Plus
CLIP-190-PN 1598 CG5020-PN 282..789 12..486 199 19.9 Plus
CLIP-190-PP 1623 CG5020-PP 307..814 12..486 199 19.9 Plus
CLIP-190-PN 1598 CG5020-PN 914..1394 2..484 165 18.2 Plus
CLIP-190-PR 1601 CG5020-PR 917..1397 2..484 165 18.2 Plus
CLIP-190-PP 1623 CG5020-PP 939..1419 2..484 165 18.2 Plus