BDGP Sequence Production Resources |
Search the DGRC for GH01248
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 12 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG33107-RA |
Protein status: | GH01248.pep: gold |
Preliminary Size: | 1308 |
Sequenced Size: | 1182 |
Gene | Date | Evidence |
---|---|---|
CG5275 | 2001-01-01 | Release 2 assignment |
CG33107 | 2002-06-07 | Blastp of sequenced clone |
CG33107 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33107 | 2008-04-29 | Release 5.5 accounting |
CG33107 | 2008-08-15 | Release 5.9 accounting |
CG33107 | 2008-12-18 | 5.12 accounting |
1182 bp (1182 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119456
> GH01248.complete AAAAATCGCCGCACGTGGAGCAACAATAATGGTATGACCGTTTACGTTCA TGCGATACAGCGCTTAACTAGGCGTTAGGCTATTTGACCCACCCCTTGGT GCCTGGTCACTCTTTCAGTTTATTATTTCTATTTATTTGCTTTGCGCATT TTTTACCGCCAATACAAAATGAATCTATCTGATTCATCGTTGAATAATTC CCTCGTGGAAGTGGATGAAATGCGCCTAGGCTATGACCACGAATCCATCA TGTCCTTTCTCCGGAAGTCGTCCATCAAGCATTTGTTTCCTTACGCTGCA GAAACCACAGACGGCAAACAGTTGCTGAATCGCATGATGGCTACCTTAGC CGGGAAGCTGGAACTCAATTTGCAGCAGCTGCTCGATCTGTTTACCCTCT CCATTATGATGATGACGTACCAAAGGGACAACGTTCTGCTGATGAAGGAG CGCTACATGATGGTGGATGTGGTGTGTCACCTGGCAGAGTCCCTGGACTC GGAGGAGATGTTCTACATGGCCAGTGGGTTGTACGAAAACCTTATCACTG GCGTGGGTATGGAGCGCCTGGAAAGAGTGCTGGACCTGCAGGCCGCGATT CCCGCCATGGTAGAATCCTGCCATCTTGGCAACGATGTAGCTATGGCCCT GCTACTCACCATAATGGGACGGTACACGGGAGAACCAGTTGAACTGGACC AGAAGGAATATGCTCTCAAGGCTTTTGAAATGGCCAAAACGGTCAACTGG CGCCAGTTGGCAAACAGTGGACGCCAGGCAGATTTGTTTATGCTCATCCG CACTTTCAGCATGATCATCAATTGCAGACGTATACGCGAGGAGTGTCCTG ATTGGAAGGACAATCTGGGTGCCGAGATACACAAGTACTTCCTGCAGGTG CGCATGGATCACTCCGCCGCCTATGGCGACTTTGAAATGATGATTGAACG ATTCATAGCTTATTGCGTGGTTCGGGGCGCCTCAACAACACCCCAACTTT GCAGCTTCAAGATTTCCGAGCAAACAAATTCAGAGTTCCAATAATTGCTG GAGTGTAGTTATGTTAAGTAGTTTACTTATTATTACAGTCTAAGAGTAAC ATAGGTATCATACAGCTGAGATCAAAAAAGCAAACCAAATATATCATTTC TTAAGTAGTGGAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18408038..18408358 | 321..1 | 1500 | 97.8 | Minus |
chr3R | 27901430 | chr3R | 18407245..18407475 | 942..712 | 1155 | 100 | Minus |
chr3R | 27901430 | chr3R | 18407533..18407739 | 712..506 | 1005 | 99 | Minus |
chr3R | 27901430 | chr3R | 18407796..18407983 | 507..320 | 910 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 18406900..18407071 | 1161..990 | 860 | 100 | Minus |
chr3R | 27901430 | chr3R | 18407141..18407188 | 989..942 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22584492..22584812 | 321..1 | 1605 | 100 | Minus |
3R | 32079331 | 3R | 22583699..22583929 | 942..712 | 1155 | 100 | Minus |
3R | 32079331 | 3R | 22583987..22584193 | 712..506 | 1035 | 100 | Minus |
3R | 32079331 | 3R | 22584250..22584437 | 507..320 | 940 | 100 | Minus |
3R | 32079331 | 3R | 22583351..22583523 | 1162..990 | 865 | 100 | Minus |
3R | 32079331 | 3R | 22583595..22583642 | 989..942 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22325323..22325643 | 321..1 | 1605 | 100 | Minus |
3R | 31820162 | 3R | 22324530..22324760 | 942..712 | 1155 | 100 | Minus |
3R | 31820162 | 3R | 22324818..22325024 | 712..506 | 1035 | 100 | Minus |
3R | 31820162 | 3R | 22325081..22325268 | 507..320 | 940 | 100 | Minus |
3R | 31820162 | 3R | 22324182..22324354 | 1162..990 | 865 | 100 | Minus |
3R | 31820162 | 3R | 22324426..22324473 | 989..942 | 240 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18407534..18407737 | 508..711 | 99 | <- | Minus |
chr3R | 18406900..18407071 | 990..1161 | 100 | <- | Minus |
chr3R | 18407141..18407187 | 943..989 | 100 | <- | Minus |
chr3R | 18407245..18407475 | 712..942 | 100 | <- | Minus |
chr3R | 18407796..18407981 | 322..507 | 98 | <- | Minus |
chr3R | 18408038..18408358 | 1..321 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..876 | 169..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..876 | 169..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..876 | 169..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..876 | 169..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..876 | 169..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..1067 | 95..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33107-RA | 1..1067 | 95..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22583352..22583523 | 990..1161 | 100 | <- | Minus |
3R | 22583595..22583641 | 943..989 | 100 | <- | Minus |
3R | 22583699..22583929 | 712..942 | 100 | <- | Minus |
3R | 22583988..22584191 | 508..711 | 100 | <- | Minus |
3R | 22584250..22584435 | 322..507 | 100 | <- | Minus |
3R | 22584492..22584812 | 1..321 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22583352..22583523 | 990..1161 | 100 | <- | Minus |
3R | 22583595..22583641 | 943..989 | 100 | <- | Minus |
3R | 22583699..22583929 | 712..942 | 100 | <- | Minus |
3R | 22583988..22584191 | 508..711 | 100 | <- | Minus |
3R | 22584250..22584435 | 322..507 | 100 | <- | Minus |
3R | 22584492..22584812 | 1..321 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22583352..22583523 | 990..1161 | 100 | <- | Minus |
3R | 22583595..22583641 | 943..989 | 100 | <- | Minus |
3R | 22583699..22583929 | 712..942 | 100 | <- | Minus |
3R | 22583988..22584191 | 508..711 | 100 | <- | Minus |
3R | 22584250..22584435 | 322..507 | 100 | <- | Minus |
3R | 22584492..22584812 | 1..321 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18409972..18410157 | 322..507 | 100 | <- | Minus |
arm_3R | 18409421..18409651 | 712..942 | 100 | <- | Minus |
arm_3R | 18409710..18409913 | 508..711 | 100 | <- | Minus |
arm_3R | 18409074..18409245 | 990..1161 | 100 | <- | Minus |
arm_3R | 18409317..18409363 | 943..989 | 100 | <- | Minus |
arm_3R | 18410214..18410534 | 1..321 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22325081..22325266 | 322..507 | 100 | <- | Minus |
3R | 22324530..22324760 | 712..942 | 100 | <- | Minus |
3R | 22324819..22325022 | 508..711 | 100 | <- | Minus |
3R | 22325323..22325643 | 1..321 | 100 | Minus | |
3R | 22324183..22324354 | 990..1161 | 100 | <- | Minus |
3R | 22324426..22324472 | 943..989 | 100 | <- | Minus |
Translation from 168 to 1043
> GH01248.hyp MNLSDSSLNNSLVEVDEMRLGYDHESIMSFLRKSSIKHLFPYAAETTDGK QLLNRMMATLAGKLELNLQQLLDLFTLSIMMMTYQRDNVLLMKERYMMVD VVCHLAESLDSEEMFYMASGLYENLITGVGMERLERVLDLQAAIPAMVES CHLGNDVAMALLLTIMGRYTGEPVELDQKEYALKAFEMAKTVNWRQLANS GRQADLFMLIRTFSMIINCRRIREECPDWKDNLGAEIHKYFLQVRMDHSA AYGDFEMMIERFIAYCVVRGASTTPQLCSFKISEQTNSEFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33107-PA | 291 | CG33107-PA | 1..291 | 1..291 | 1488 | 100 | Plus |
Translation from 168 to 1043
> GH01248.pep MNLSDSSLNNSLVEVDEMRLGYDHESIMSFLRKSSIKHLFPYAAETTDGK QLLNRMMATLAGKLELNLQQLLDLFTLSIMMMTYQRDNVLLMKERYMMVD VVCHLAESLDSEEMFYMASGLYENLITGVGMERLERVLDLQAAIPAMVES CHLGNDVAMALLLTIMGRYTGEPVELDQKEYALKAFEMAKTVNWRQLANS GRQADLFMLIRTFSMIINCRRIREECPDWKDNLGAEIHKYFLQVRMDHSA AYGDFEMMIERFIAYCVVRGASTTPQLCSFKISEQTNSEFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16144-PA | 298 | GF16144-PA | 1..293 | 1..291 | 991 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12503-PA | 298 | GG12503-PA | 1..291 | 1..291 | 1229 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17151-PA | 269 | GH17151-PA | 17..265 | 19..273 | 359 | 33.1 | Plus |
Dgri\GH24850-PA | 360 | GH24850-PA | 101..340 | 19..259 | 303 | 29.6 | Plus |
Dgri\GH10064-PA | 192 | GH10064-PA | 17..192 | 19..197 | 231 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33107-PA | 291 | CG33107-PA | 1..291 | 1..291 | 1488 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16187-PA | 414 | GI16187-PA | 159..412 | 21..272 | 349 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13678-PA | 273 | GL13678-PA | 6..270 | 3..271 | 535 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17287-PA | 277 | GA17287-PA | 6..274 | 3..271 | 519 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23635-PA | 291 | GM23635-PA | 1..291 | 1..291 | 1359 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18445-PA | 291 | GD18445-PA | 1..291 | 1..291 | 1366 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16675-PA | 484 | GJ16675-PA | 226..482 | 22..272 | 422 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11784-PA | 286 | GK11784-PA | 6..282 | 1..275 | 548 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24023-PA | 289 | GE24023-PA | 1..289 | 1..289 | 1237 | 82.7 | Plus |