BDGP Sequence Production Resources |
Search the DGRC for GH01314
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 13 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | FeCH-RC |
Protein status: | GH01314.pep: gold |
Preliminary Size: | 1349 |
Sequenced Size: | 1427 |
Gene | Date | Evidence |
---|---|---|
CG2098 | 2001-01-01 | Release 2 assignment |
CG2098 | 2001-09-19 | Blastp of sequenced clone |
CG2098 | 2003-01-01 | Sim4 clustering to Release 3 |
ferrochelatase | 2008-04-29 | Release 5.5 accounting |
ferrochelatase | 2008-08-15 | Release 5.9 accounting |
ferrochelatase | 2008-12-18 | 5.12 accounting |
1427 bp (1427 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058251
> GH01314.complete ATCAATTTGGGTCAATTTAAAAGGAACTATGTTTTTGCATAACACAAAGT TTTGCAGACTGGCAAGTGGTCTGGCAGGAGGAGTGCGCAACCTGAGCGGC CAAAAACCGAAGACCGCGATCCTAATGCTGAACATGGGCGGTCCGACCCA CACGGACCAGGTGCATGACTACCTCCTGCGTATTATGACCGACCGGGACA TGATCCAGCTGCCGGTGCAGAGCCGTCTTGGTCCGTGGATCGCCCAGCGC AGGACGCCCGAGGTACAGAAGAAGTACAAGGAGATCGGCGGTGGTTCACC GATTCTTAAGTGGACCGAGCTGCAGGGCCAGCTCATGTGCGAGCAGTTGG ACAGAATCTCCCCGGAGACAGCACCTCACAAGCACTACGTCGGTTTCCGC TACGTGAATCCCCTCACTGAGAACACGCTGGCCGAGATCGAAAAGGACAA ACCAGAGCGCGTTGTACTCTTTTCACAATATCCACAGTACAGCTGCGCCA CCTCCGGATCCAGCTTTAACTCCATATTTACTCATTATCGGAGCAATAAT CTGCCCTCGGATATCAAATGGAGCATTATCGACAGGTGGGGCACTCATCC ACTTCTAATCAAAACGTTTGCCCAGCGAATTCGCGACGAGCTGGCCAAAT TTGTGGAAACGAAACGAAATGATGTGGTCATCCTCTTCACTGCCCACTCC CTTCCCCTTAAGGCTGTGAACCGGGGTGACGCGTATCCCTCGGAGATTGG TGCTAGCGTACACATGGTGATGCAGGAACTTGGTCAGACGAATCCCTACA GCCTGGCATGGCAATCCAAGGTGGGCCCGCTACCCTGGCTGGCGCCCGCA ACTGATGATGCCATTAAGGTGTAACTTTAATGCCGGATTTCCATTCCCAT CCACTAAAACCAATCCCATCTTTACAGGGCTATGTTAAGCAAGGCCTGAA GAACTTCATCCTTGTGCCCATTGCCTTCGTGAACGAGCACATCGAGACGC TGCATGAGCTCGACATCGAGTACTGCGACGAACTGGCCAAGGAGGTAGGC GTAGAGGAAATCCGTCGAGCTGCAACCCCCAACGACCACCCGCTGTTCAT CGACGCCCTGACAAACGTTGTGGCAGACCACCTGAAGTCCCAGCAGGCAG TCAACCCCAAGTTCCTCATGCGTTGTCCCATGTGCTCCAATCCAAAGTGC AGGGAGAGCAAAAGCTGGTACCGCCAGCTCTGCTCGAACTAAGCAACCAA GTCAACTTGCGGGGGTGGGTAGCACTGCGTGACAAGCGTTTCAAGTGCTG CAGCTGGAGGAGAACATTTATGCATTCATTTGGGTTTCTGGGGGATTGGT TTTCACATACTGGTGTTTATTTCTTTCCGCTTTAATTAAAGTCTCTGTTG AACAGTATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ferrochelatase-RC | 1443 | ferrochelatase-RC | 30..1443 | 1..1414 | 7070 | 100 | Plus |
ferrochelatase-RA | 1508 | ferrochelatase-RA | 86..954 | 1..869 | 4345 | 100 | Plus |
ferrochelatase.a | 1332 | ferrochelatase.a | 26..846 | 1..821 | 4105 | 100 | Plus |
ferrochelatase-RA | 1508 | ferrochelatase-RA | 952..1440 | 926..1414 | 2445 | 100 | Plus |
ferrochelatase.a | 1332 | ferrochelatase.a | 844..1332 | 926..1414 | 2445 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 27632818..27633679 | 1408..547 | 4310 | 100 | Minus |
chr3R | 27901430 | chr3R | 27634098..27634477 | 445..66 | 1900 | 100 | Minus |
chr3R | 27901430 | chr3R | 27633735..27633836 | 546..445 | 510 | 100 | Minus |
chr3R | 27901430 | chr3R | 27634529..27634596 | 68..1 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 31810454..31811321 | 1414..547 | 4340 | 100 | Minus |
3R | 32079331 | 3R | 31811740..31812119 | 445..66 | 1900 | 100 | Minus |
3R | 32079331 | 3R | 31811377..31811478 | 546..445 | 510 | 100 | Minus |
3R | 32079331 | 3R | 31812171..31812238 | 68..1 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 31551285..31552152 | 1414..547 | 4340 | 100 | Minus |
3R | 31820162 | 3R | 31552571..31552950 | 445..66 | 1900 | 100 | Minus |
3R | 31820162 | 3R | 31552208..31552309 | 546..445 | 510 | 100 | Minus |
3R | 31820162 | 3R | 31553002..31553069 | 68..1 | 340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27634099..27634477 | 66..444 | 100 | <- | Minus |
chr3R | 27634532..27634596 | 1..65 | 100 | Minus | |
chr3R | 27633735..27633836 | 445..546 | 100 | <- | Minus |
chr3R | 27632818..27633679 | 547..1408 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ferrochelatase-RC | 1..846 | 29..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ferrochelatase-RC | 1..846 | 29..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FeCH-RC | 1..846 | 29..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ferrochelatase-RC | 1..846 | 29..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FeCH-RC | 1..846 | 29..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ferrochelatase-RC | 26..1433 | 1..1408 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ferrochelatase-RC | 26..1433 | 1..1408 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FeCH-RC | 59..1466 | 1..1408 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ferrochelatase-RC | 26..1433 | 1..1408 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FeCH-RC | 59..1466 | 1..1408 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31810460..31811321 | 547..1408 | 100 | <- | Minus |
3R | 31811377..31811478 | 445..546 | 100 | <- | Minus |
3R | 31811741..31812119 | 66..444 | 100 | <- | Minus |
3R | 31812174..31812238 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31810460..31811321 | 547..1408 | 100 | <- | Minus |
3R | 31811377..31811478 | 445..546 | 100 | <- | Minus |
3R | 31811741..31812119 | 66..444 | 100 | <- | Minus |
3R | 31812174..31812238 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31810460..31811321 | 547..1408 | 100 | <- | Minus |
3R | 31811377..31811478 | 445..546 | 100 | <- | Minus |
3R | 31811741..31812119 | 66..444 | 100 | <- | Minus |
3R | 31812174..31812238 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27636182..27637043 | 547..1408 | 100 | <- | Minus |
arm_3R | 27637099..27637200 | 445..546 | 100 | <- | Minus |
arm_3R | 27637463..27637841 | 66..444 | 100 | <- | Minus |
arm_3R | 27637896..27637960 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31551291..31552152 | 547..1408 | 100 | <- | Minus |
3R | 31552208..31552309 | 445..546 | 100 | <- | Minus |
3R | 31552572..31552950 | 66..444 | 100 | <- | Minus |
3R | 31553005..31553069 | 1..65 | 100 | Minus |
Translation from 1 to 873
> GH01314.hyp SIWVNLKGTMFLHNTKFCRLASGLAGGVRNLSGQKPKTAILMLNMGGPTH TDQVHDYLLRIMTDRDMIQLPVQSRLGPWIAQRRTPEVQKKYKEIGGGSP ILKWTELQGQLMCEQLDRISPETAPHKHYVGFRYVNPLTENTLAEIEKDK PERVVLFSQYPQYSCATSGSSFNSIFTHYRSNNLPSDIKWSIIDRWGTHP LLIKTFAQRIRDELAKFVETKRNDVVILFTAHSLPLKAVNRGDAYPSEIG ASVHMVMQELGQTNPYSLAWQSKVGPLPWLAPATDDAIKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FeCH-PC | 281 | CG2098-PC | 1..281 | 10..290 | 1490 | 100 | Plus |
FeCH-PA | 384 | CG2098-PA | 1..280 | 10..289 | 1486 | 100 | Plus |
FeCH-PB | 226 | CG2098-PB | 12..122 | 179..289 | 568 | 97.3 | Plus |
Translation from 28 to 873
> GH01314.pep MFLHNTKFCRLASGLAGGVRNLSGQKPKTAILMLNMGGPTHTDQVHDYLL RIMTDRDMIQLPVQSRLGPWIAQRRTPEVQKKYKEIGGGSPILKWTELQG QLMCEQLDRISPETAPHKHYVGFRYVNPLTENTLAEIEKDKPERVVLFSQ YPQYSCATSGSSFNSIFTHYRSNNLPSDIKWSIIDRWGTHPLLIKTFAQR IRDELAKFVETKRNDVVILFTAHSLPLKAVNRGDAYPSEIGASVHMVMQE LGQTNPYSLAWQSKVGPLPWLAPATDDAIKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17503-PA | 384 | GF17503-PA | 1..280 | 1..280 | 1429 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11845-PA | 384 | GG11845-PA | 1..280 | 1..280 | 1480 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17474-PA | 390 | GH17474-PA | 1..286 | 1..280 | 1344 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FeCH-PC | 281 | CG2098-PC | 1..281 | 1..281 | 1490 | 100 | Plus |
FeCH-PA | 384 | CG2098-PA | 1..280 | 1..280 | 1486 | 100 | Plus |
FeCH-PB | 226 | CG2098-PB | 12..122 | 170..280 | 568 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22800-PA | 387 | GI22800-PA | 1..283 | 1..280 | 1339 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23499-PA | 388 | GL23499-PA | 1..283 | 1..280 | 1367 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15238-PB | 308 | GA15238-PB | 1..284 | 1..281 | 1372 | 89.8 | Plus |
Dpse\GA15238-PA | 388 | GA15238-PA | 1..283 | 1..280 | 1371 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16409-PA | 384 | GM16409-PA | 1..280 | 1..280 | 1492 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16217-PA | 384 | GD16217-PA | 1..280 | 1..280 | 1496 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22803-PA | 387 | GJ22803-PA | 1..283 | 1..280 | 1357 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10937-PA | 383 | GK10937-PA | 1..279 | 1..280 | 1350 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23292-PA | 384 | GE23292-PA | 1..280 | 1..280 | 1496 | 98.6 | Plus |