BDGP Sequence Production Resources |
Search the DGRC for GH01464
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 14 |
Well: | 64 |
Vector: | pOT2 |
Associated Gene/Transcript | SCOT-RA |
Protein status: | GH01464.pep: gold |
Preliminary Size: | 1884 |
Sequenced Size: | 1775 |
Gene | Date | Evidence |
---|---|---|
CG1140 | 2001-01-01 | Release 2 assignment |
CG1140 | 2001-09-19 | Blastp of sequenced clone |
CG1140 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1140 | 2008-04-29 | Release 5.5 accounting |
CG1140 | 2008-08-15 | Release 5.9 accounting |
CG1140 | 2008-12-18 | 5.12 accounting |
1775 bp (1775 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058254
> GH01464.complete ATTCTGGCTTGTGTTGATCCGCCGAGCAGTTTGCTTTAGTTTAAATACGT TTTTATTACTTTAAATACACTTAAGTTAAAATGCTCTGCCGACTGGTGGG AAACAGGAGTTTGGGTGCACGATATACCGCCTCCATCAAGGCTATTGCGT GCTACTCCACGTCGGGAAAACAGCGGAACGGCAAGATCTACGAGTCGGCC ATAGATGCTGTGGCCGATGTGCAGGATGGTGCCCAGATCCTGTTCGGCGG ATTCGGAATCTGCGGCATTCCGGAGAAGATGATCAACGCGCTCAAGCAGA AAGGAGTCAAGAACATCACTGGCGTTTCCAACAATGGAGGTGTGGACGAC ACTGGTCTGGGTGTCCTGATCAAGCAGAAGCAGGTGTCCAAGGTAATTGG CTCCTATGTCGGCGAAAACACGGAGTTGGTGCGTCAATATCTGGAAGGAG AACTGGCCGTGGAACTGACTCCCCAAGGCACCCTAGCGGAAAAGATCCGC GCTGGAGGAGCCGGCATTCCGGCCTTCTACACGCCCACTGGCTACGCCAC TCTTGTCCAGGAAGGCGGAGCACCCATTAAGTACTCCAAGGATGGCAAAG TGGAAATATCCAGCGAAAAGAAGCCCGTGAAGGAGTTCAACGGAAAGAAC TACGTGATGGAGGAGTCCATCTTCGCAGACTTTGCCTTTGTCAAGGCCCA GAAGGCCGATCCCTTGGGCAATCTGGTGTTCAACAAAGCTGCCAGAAACT TCAATGCACCCATGTGCAGGGCTGCCAAAATCACCGTGGCCGAAGTGGAG GAAATCGTGCCCATCGGAGCCCTTTCTCCCGATGAGATCCATGTGCCCGG CATCTACATTAACCGCATCTTCAAGGGCACCAACTACAACAAGCGTGTGG AACGCTTGCGCATCACGGAACCCAAGGATCCCAGCAAACCCGCTCCTCCA CCAAATCCCGCCCAGGTTTTACGTGAGCGCATTGCCCGTCGAGTGGCTCT TGAGTTCCACGACGGCATGTATGCCAATCTGGGCATTGGCATTCCCGTGC TCTCCTCCAACTACATCCCCAAGGGCATGAACGTGATGCTGCAGTCGGAG AACGGAATCCTGGGCCTGGGACCCTTCCCCACCAAGGATAAAGTGGATCC GGACTTGATCAACGCCGGAAAGGAGAGTGTTACCGTGGTGCCCGGAGCCT CATACTTTGGCTCCGATGACAGCTTTGCCATGATCCGTGGTGGTCATGTG GATATCACCATTTTGGGCGCCATGGAGGTGTCGGCCACAGGCGATCTGGC CAACTGGATGATTCCTGGCAAACTGGTTAAGGGAATGGGTGGAGCCATGG ATTTGGTGGCTGCGCCTGGCACCAAGGTGATCATCACCATGGAGCACAAT GCCCGCGATGGTTCCCCCAAGATCCTGGACACCTGCTCCCTTCCGCTCAC TGGCAAGGGTGTGATCGACATGATCATCTCGGAGAAGGCTGTCTTCACGG TGGAAAAGGGCGTGGGCCTAACGCTGATCGAGGTGGCCGAGGGTTACACC GTGGACGACATCATTGCCAGCACTGGAGCCAAGTTCACAGTGTCGCCCAA TCTGAAGAAAATGGGTCAAATTCCGGTCTGATGAGCCACGTGCTTAGTGC CCAGAGAAGCTGCAATACCTCCGGTTGAGTGATAAACGAGTGCATTTATT TTTTGTTGACCGTGTGACAAAAACATTTGTGTTAAATATATGGACCATAT CAAATCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1140-RA | 1802 | CG1140-RA | 43..1801 | 1..1759 | 8795 | 100 | Plus |
CG1140.a | 1704 | CG1140.a | 83..1703 | 139..1759 | 8105 | 100 | Plus |
CG1140-RB | 1969 | CG1140-RB | 349..1968 | 140..1759 | 8100 | 100 | Plus |
CG1140.a | 1704 | CG1140.a | 1..69 | 72..140 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1964890..1965869 | 338..1317 | 4900 | 100 | Plus |
chr3L | 24539361 | chr3L | 1965927..1966367 | 1317..1757 | 2205 | 100 | Plus |
chr3L | 24539361 | chr3L | 1964635..1964837 | 139..341 | 1015 | 100 | Plus |
chr3L | 24539361 | chr3L | 1964032..1964172 | 1..141 | 705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1965328..1966307 | 338..1317 | 4900 | 100 | Plus |
3L | 28110227 | 3L | 1966365..1966807 | 1317..1759 | 2215 | 100 | Plus |
3L | 28110227 | 3L | 1965073..1965275 | 139..341 | 1015 | 100 | Plus |
3L | 28110227 | 3L | 1964470..1964610 | 1..141 | 705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1965328..1966307 | 338..1317 | 4900 | 100 | Plus |
3L | 28103327 | 3L | 1966365..1966807 | 1317..1759 | 2215 | 100 | Plus |
3L | 28103327 | 3L | 1965073..1965275 | 139..341 | 1015 | 100 | Plus |
3L | 28103327 | 3L | 1964470..1964610 | 1..141 | 705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2478..2521 | 848..891 | 121 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1964032..1964171 | 1..140 | 100 | -> | Plus |
chr3L | 1964637..1964835 | 141..339 | 100 | -> | Plus |
chr3L | 1964892..1965868 | 340..1316 | 100 | -> | Plus |
chr3L | 1965927..1966367 | 1317..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 1..1551 | 81..1631 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 1..1551 | 81..1631 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 1..1551 | 81..1631 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 1..1551 | 81..1631 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCOT-RA | 1..1551 | 81..1631 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 1..1757 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 1..1757 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 12..1768 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1140-RA | 1..1757 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCOT-RA | 12..1768 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1964470..1964609 | 1..140 | 100 | -> | Plus |
3L | 1965075..1965273 | 141..339 | 100 | -> | Plus |
3L | 1965330..1966306 | 340..1316 | 100 | -> | Plus |
3L | 1966365..1966805 | 1317..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1964470..1964609 | 1..140 | 100 | -> | Plus |
3L | 1965075..1965273 | 141..339 | 100 | -> | Plus |
3L | 1965330..1966306 | 340..1316 | 100 | -> | Plus |
3L | 1966365..1966805 | 1317..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1964470..1964609 | 1..140 | 100 | -> | Plus |
3L | 1965075..1965273 | 141..339 | 100 | -> | Plus |
3L | 1965330..1966306 | 340..1316 | 100 | -> | Plus |
3L | 1966365..1966805 | 1317..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1964470..1964609 | 1..140 | 100 | -> | Plus |
arm_3L | 1965075..1965273 | 141..339 | 100 | -> | Plus |
arm_3L | 1965330..1966306 | 340..1316 | 100 | -> | Plus |
arm_3L | 1966365..1966805 | 1317..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1964470..1964609 | 1..140 | 100 | -> | Plus |
3L | 1965075..1965273 | 141..339 | 100 | -> | Plus |
3L | 1965330..1966306 | 340..1316 | 100 | -> | Plus |
3L | 1966365..1966805 | 1317..1757 | 100 | Plus |
Translation from 80 to 1630
> GH01464.pep MLCRLVGNRSLGARYTASIKAIACYSTSGKQRNGKIYESAIDAVADVQDG AQILFGGFGICGIPEKMINALKQKGVKNITGVSNNGGVDDTGLGVLIKQK QVSKVIGSYVGENTELVRQYLEGELAVELTPQGTLAEKIRAGGAGIPAFY TPTGYATLVQEGGAPIKYSKDGKVEISSEKKPVKEFNGKNYVMEESIFAD FAFVKAQKADPLGNLVFNKAARNFNAPMCRAAKITVAEVEEIVPIGALSP DEIHVPGIYINRIFKGTNYNKRVERLRITEPKDPSKPAPPPNPAQVLRER IARRVALEFHDGMYANLGIGIPVLSSNYIPKGMNVMLQSENGILGLGPFP TKDKVDPDLINAGKESVTVVPGASYFGSDDSFAMIRGGHVDITILGAMEV SATGDLANWMIPGKLVKGMGGAMDLVAAPGTKVIITMEHNARDGSPKILD TCSLPLTGKGVIDMIISEKAVFTVEKGVGLTLIEVAEGYTVDDIIASTGA KFTVSPNLKKMGQIPV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24850-PA | 516 | GF24850-PA | 1..516 | 1..516 | 2403 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14840-PA | 516 | GG14840-PA | 1..516 | 1..516 | 2645 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14994-PA | 517 | GH14994-PA | 1..517 | 1..516 | 2342 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SCOT-PA | 516 | CG1140-PA | 1..516 | 1..516 | 2635 | 100 | Plus |
SCOT-PB | 502 | CG1140-PB | 5..502 | 19..516 | 2536 | 99.6 | Plus |
SCOT-PC | 450 | CG1140-PC | 1..450 | 67..516 | 2296 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13155-PA | 514 | GI13155-PA | 1..514 | 1..516 | 2322 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22911-PA | 516 | GL22911-PA | 1..516 | 1..516 | 2500 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10977-PA | 516 | GA10977-PA | 1..516 | 1..516 | 2495 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14463-PA | 516 | GM14463-PA | 1..516 | 1..516 | 2676 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13661-PA | 516 | GD13661-PA | 1..516 | 1..516 | 2671 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11929-PA | 515 | GJ11929-PA | 1..515 | 1..516 | 2355 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12531-PA | 514 | GK12531-PA | 1..514 | 1..516 | 2354 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21204-PA | 516 | GE21204-PA | 1..516 | 1..516 | 2646 | 97.9 | Plus |
Translation from 80 to 1630
> GH01464.hyp MLCRLVGNRSLGARYTASIKAIACYSTSGKQRNGKIYESAIDAVADVQDG AQILFGGFGICGIPEKMINALKQKGVKNITGVSNNGGVDDTGLGVLIKQK QVSKVIGSYVGENTELVRQYLEGELAVELTPQGTLAEKIRAGGAGIPAFY TPTGYATLVQEGGAPIKYSKDGKVEISSEKKPVKEFNGKNYVMEESIFAD FAFVKAQKADPLGNLVFNKAARNFNAPMCRAAKITVAEVEEIVPIGALSP DEIHVPGIYINRIFKGTNYNKRVERLRITEPKDPSKPAPPPNPAQVLRER IARRVALEFHDGMYANLGIGIPVLSSNYIPKGMNVMLQSENGILGLGPFP TKDKVDPDLINAGKESVTVVPGASYFGSDDSFAMIRGGHVDITILGAMEV SATGDLANWMIPGKLVKGMGGAMDLVAAPGTKVIITMEHNARDGSPKILD TCSLPLTGKGVIDMIISEKAVFTVEKGVGLTLIEVAEGYTVDDIIASTGA KFTVSPNLKKMGQIPV*