BDGP Sequence Production Resources |
Search the DGRC for GH01515
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 15 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | TMS1-RA |
Protein status: | GH01515.pep: gold |
Preliminary Size: | 2016 |
Sequenced Size: | 1733 |
Gene | Date | Evidence |
---|---|---|
CG4672 | 2001-01-01 | Release 2 assignment |
CG4672 | 2001-09-19 | Blastp of sequenced clone |
CG4672 | 2003-01-01 | Sim4 clustering to Release 3 |
TMS1 | 2008-04-29 | Release 5.5 accounting |
TMS1 | 2008-08-15 | Release 5.9 accounting |
TMS1 | 2008-12-18 | 5.12 accounting |
1733 bp (1733 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058257
> GH01515.complete CATCTCTATCATTTTCACAAACAAAGATTTGTTTAATTTAATAAAAACGC AGTTTGACTAAAGTAAAAATCTAAGTTTATTGCTGCAACAATGGGAGCTG CTTTGGGCATCTGTTCAGCCGCTCAGTGCGCCATGTGCTGTGGAGGCACT GCAGCCAGCATGTGCTGCTCCGCCTGCCCGAGCTGCACCAACGCCTCCTC ATCGCGCTTCATGTACGCCTTCATCCTCCTGGTGGGCACCGTACTGGGGG CGATTGCGCTGTCCCCTGGACTGCAGGACACCCTGAAGAAGATGCCCTTC TGCATCAACTCCACCTCGTCGTATAGCTCGGGAGCACTCAGCGCTGTCTC GGGAGGATCTCTGCAAGTCGACTGCGAGTATGCACTTGGTTACATGGCAG TATATAGGGTTTGCTTTGGCATGGCCTGCTTTTTCGCTCTGATGTCACTG ATTATGCTGGGTGTGAAGAGCTCCAGGGATCCGCGTTCGCACATCCAGAA CAACTTTTGGCCACTGAAATTTCTGATCTGCTTTGGCGCTGCGATTGGAG CCATCTTTATTCCGGATGGATCCTTTGGTCCGGCCATGATGTGGGTGGGT CTAATTGGTGGCCTGGCCTTCATACTCGTCCAGCTGGTCATCATTGTGGA TTTCGCTCACTCGCTGGCTGAAAACTGGATAGAAAGCGCCGAAAACAGTC GTGGATACTACTATGCCCTCGCTGGGGTCACTCTTTTGTGCTATATCTTA TCGCTGACTGGAATTACCTTGCTTTATATCTACTTCACCACCAGTACTGG CTGCGGCATCAACAAGTTCTTCATCTCCATCAATCTCATATTCTGTCTGG CGATTAGCGTCATTTCGATTCTGCCAGCTGTGCAGGAACGCTTGCCCCAT TCTGGCCTACTGCAGAGCTCCCTGGTTACCTTGTACACGGTGTATCTAAC CTGGTCGGCAGTGGCCAACAATCCTGAGAAAGAATGCAATCCAGGCATGT TTGGCATGATGGAGGGATTCGGCAATGCAACCACCACGGCAGCACCGCCC ACCCACACCACCAGGGTCACCTTCGATACGACCAACATCATCGGACTGGT CGTCTGGTTGCTGTGCATCCTGTACAATTGCATTAGCTCGGCGGTGGAGG TATCCAAGATCTCGCACGATAATAGCGAGAAGCGTGTTTTAACAGAAGCT CTATCAGACACAGAGGCGGGCACGGATGGCAGCGGAAAGCCGAGCACCGA CACCGAGACCGAAGGCGTCACCTACTCCTGGTCCATGTTCCACTTGGTCT TCGTCTGCGCCTCGCTCTATGTCATGATGACCCTGACCAACTGGTACAAA CCTCATTCGGAAATCGAGCTGTTCAACGGCAACGAGGCTTCCATGTGGGT CAAGATCGTCTCCAGTTGGCTGGGTGTCTTCATCTATGGCTGGAGCCTTG CAGCGCCCATTGTTCTTACCAATCGCGACTTTAGCTAAGCGATTTTAGTA TATTAACGTCTAGGAATGGTGCTTAAACGAGCAAAACGAGAATGCCAAAA CGGAACGCGGAGAGGAAATAGTATCCGAAACTGATGCAGATTAACCATAC ACAATTTTGACTCTACATGTGGTGTCTACTCATTGATCTTATTCTCAAAT TGCAAAAGTTATCAATATATAAATTAATCTATTATATATACATACAAATA CAACAGAACTTAACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TMS1-RA | 1849 | TMS1-RA | 62..1779 | 1..1718 | 8590 | 100 | Plus |
TMS1.g | 1778 | TMS1.g | 185..1778 | 124..1717 | 7970 | 100 | Plus |
TMS1.d | 1840 | TMS1.d | 62..1247 | 1..1186 | 5930 | 100 | Plus |
TMS1.d | 1840 | TMS1.d | 1247..1770 | 1195..1718 | 2620 | 100 | Plus |
TMS1.g | 1778 | TMS1.g | 34..159 | 1..126 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16403026..16403584 | 124..682 | 2750 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 16404796..16405165 | 1346..1715 | 1835 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 16404062..16404272 | 976..1186 | 1040 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 16403819..16404002 | 793..976 | 905 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 16404572..16404735 | 1186..1349 | 820 | 100 | Plus |
chr3L | 24539361 | chr3L | 16402536..16402661 | 1..126 | 630 | 100 | Plus |
chr3L | 24539361 | chr3L | 16403648..16403759 | 681..792 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16413245..16413803 | 124..682 | 2795 | 100 | Plus |
3L | 28110227 | 3L | 16415017..16415389 | 1346..1718 | 1850 | 99.7 | Plus |
3L | 28110227 | 3L | 16414283..16414493 | 976..1186 | 1055 | 100 | Plus |
3L | 28110227 | 3L | 16414038..16414221 | 793..976 | 920 | 100 | Plus |
3L | 28110227 | 3L | 16414793..16414956 | 1186..1349 | 820 | 100 | Plus |
3L | 28110227 | 3L | 16412755..16412880 | 1..126 | 630 | 100 | Plus |
3L | 28110227 | 3L | 16413867..16413978 | 681..792 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16406345..16406903 | 124..682 | 2795 | 100 | Plus |
3L | 28103327 | 3L | 16408117..16408489 | 1346..1718 | 1850 | 99.7 | Plus |
3L | 28103327 | 3L | 16407383..16407593 | 976..1186 | 1055 | 100 | Plus |
3L | 28103327 | 3L | 16407138..16407321 | 793..976 | 920 | 100 | Plus |
3L | 28103327 | 3L | 16407893..16408056 | 1186..1349 | 820 | 100 | Plus |
3L | 28103327 | 3L | 16405855..16405980 | 1..126 | 630 | 100 | Plus |
3L | 28103327 | 3L | 16406967..16407078 | 681..792 | 560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16402536..16402661 | 1..126 | 100 | -> | Plus |
chr3L | 16403029..16403584 | 127..682 | 99 | -> | Plus |
chr3L | 16403650..16403759 | 683..792 | 100 | -> | Plus |
chr3L | 16403819..16404002 | 793..976 | 99 | -> | Plus |
chr3L | 16404063..16404272 | 977..1186 | 99 | -> | Plus |
chr3L | 16404573..16404735 | 1187..1349 | 100 | -> | Plus |
chr3L | 16404800..16405165 | 1350..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1398 | 91..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1398 | 91..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1398 | 91..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1398 | 91..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1398 | 91..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1715 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1715 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 34..1748 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 1..1715 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TMS1-RA | 34..1748 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16414794..16414956 | 1187..1349 | 100 | -> | Plus |
3L | 16412755..16412880 | 1..126 | 100 | -> | Plus |
3L | 16413248..16413803 | 127..682 | 100 | -> | Plus |
3L | 16413869..16413978 | 683..792 | 100 | -> | Plus |
3L | 16414038..16414221 | 793..976 | 100 | -> | Plus |
3L | 16414284..16414493 | 977..1186 | 100 | -> | Plus |
3L | 16415021..16415386 | 1350..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16414794..16414956 | 1187..1349 | 100 | -> | Plus |
3L | 16412755..16412880 | 1..126 | 100 | -> | Plus |
3L | 16413248..16413803 | 127..682 | 100 | -> | Plus |
3L | 16413869..16413978 | 683..792 | 100 | -> | Plus |
3L | 16414038..16414221 | 793..976 | 100 | -> | Plus |
3L | 16414284..16414493 | 977..1186 | 100 | -> | Plus |
3L | 16415021..16415386 | 1350..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16414794..16414956 | 1187..1349 | 100 | -> | Plus |
3L | 16412755..16412880 | 1..126 | 100 | -> | Plus |
3L | 16413248..16413803 | 127..682 | 100 | -> | Plus |
3L | 16413869..16413978 | 683..792 | 100 | -> | Plus |
3L | 16414038..16414221 | 793..976 | 100 | -> | Plus |
3L | 16414284..16414493 | 977..1186 | 100 | -> | Plus |
3L | 16415021..16415386 | 1350..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16407384..16407593 | 977..1186 | 100 | -> | Plus |
arm_3L | 16407894..16408056 | 1187..1349 | 100 | -> | Plus |
arm_3L | 16407138..16407321 | 793..976 | 100 | -> | Plus |
arm_3L | 16405855..16405980 | 1..126 | 100 | -> | Plus |
arm_3L | 16406348..16406903 | 127..682 | 100 | -> | Plus |
arm_3L | 16406969..16407078 | 683..792 | 100 | -> | Plus |
arm_3L | 16408121..16408486 | 1350..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16405855..16405980 | 1..126 | 100 | -> | Plus |
3L | 16406348..16406903 | 127..682 | 100 | -> | Plus |
3L | 16406969..16407078 | 683..792 | 100 | -> | Plus |
3L | 16407138..16407321 | 793..976 | 100 | -> | Plus |
3L | 16407384..16407593 | 977..1186 | 100 | -> | Plus |
3L | 16407894..16408056 | 1187..1349 | 100 | -> | Plus |
3L | 16408121..16408486 | 1350..1715 | 100 | Plus |
Translation from 90 to 1487
> GH01515.pep MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFMYAFILLVGT VLGAIALSPGLQDTLKKMPFCINSTSSYSSGALSAVSGGSLQVDCEYALG YMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKFLICFGA AIGAIFIPDGSFGPAMMWVGLIGGLAFILVQLVIIVDFAHSLAENWIESA ENSRGYYYALAGVTLLCYILSLTGITLLYIYFTTSTGCGINKFFISINLI FCLAISVISILPAVQERLPHSGLLQSSLVTLYTVYLTWSAVANNPEKECN PGMFGMMEGFGNATTTAAPPTHTTRVTFDTTNIIGLVVWLLCILYNCISS AVEVSKISHDNSEKRVLTEALSDTEAGTDGSGKPSTDTETEGVTYSWSMF HLVFVCASLYVMMTLTNWYKPHSEIELFNGNEASMWVKIVSSWLGVFIYG WSLAAPIVLTNRDFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24277-PA | 465 | GF24277-PA | 1..465 | 1..465 | 2214 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16004-PA | 465 | GG16004-PA | 1..465 | 1..465 | 2416 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15892-PA | 465 | GH15892-PA | 1..465 | 1..465 | 2083 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TMS1-PA | 465 | CG4672-PA | 1..465 | 1..465 | 2441 | 100 | Plus |
TMS1-PB | 462 | CG4672-PB | 1..462 | 1..465 | 2414 | 99.4 | Plus |
TMS1-PD | 461 | CG4672-PD | 1..461 | 1..465 | 2408 | 99.1 | Plus |
TMS1-PC | 458 | CG4672-PC | 1..458 | 1..465 | 2393 | 98.5 | Plus |
TMS1-PE | 456 | CG4672-PE | 1..456 | 1..465 | 2380 | 98.1 | Plus |
TMS1-PF | 467 | CG4672-PF | 1..430 | 1..433 | 2169 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16544-PA | 464 | GI16544-PA | 1..464 | 1..465 | 2094 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17862-PA | 469 | GL17862-PA | 1..469 | 1..465 | 2244 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28520-PA | 403 | GA28520-PA | 169..403 | 235..465 | 1085 | 88.1 | Plus |
Dpse\GA28520-PA | 403 | GA28520-PA | 1..168 | 1..168 | 847 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25636-PA | 463 | GM25636-PA | 1..463 | 1..465 | 2413 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14640-PA | 463 | GD14640-PA | 1..463 | 1..465 | 2282 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12796-PA | 465 | GJ12796-PA | 1..465 | 1..465 | 2082 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16715-PA | 470 | GK16715-PA | 1..470 | 1..465 | 2108 | 84.7 | Plus |
Translation from 90 to 1487
> GH01515.hyp MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFMYAFILLVGT VLGAIALSPGLQDTLKKMPFCINSTSSYSSGALSAVSGGSLQVDCEYALG YMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKFLICFGA AIGAIFIPDGSFGPAMMWVGLIGGLAFILVQLVIIVDFAHSLAENWIESA ENSRGYYYALAGVTLLCYILSLTGITLLYIYFTTSTGCGINKFFISINLI FCLAISVISILPAVQERLPHSGLLQSSLVTLYTVYLTWSAVANNPEKECN PGMFGMMEGFGNATTTAAPPTHTTRVTFDTTNIIGLVVWLLCILYNCISS AVEVSKISHDNSEKRVLTEALSDTEAGTDGSGKPSTDTETEGVTYSWSMF HLVFVCASLYVMMTLTNWYKPHSEIELFNGNEASMWVKIVSSWLGVFIYG WSLAAPIVLTNRDFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TMS1-PA | 465 | CG4672-PA | 1..465 | 1..465 | 2441 | 100 | Plus |
TMS1-PB | 462 | CG4672-PB | 1..462 | 1..465 | 2414 | 99.4 | Plus |
TMS1-PD | 461 | CG4672-PD | 1..461 | 1..465 | 2408 | 99.1 | Plus |
TMS1-PC | 458 | CG4672-PC | 1..458 | 1..465 | 2393 | 98.5 | Plus |
TMS1-PE | 456 | CG4672-PE | 1..456 | 1..465 | 2380 | 98.1 | Plus |