BDGP Sequence Production Resources |
Search the DGRC for GH01546
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 15 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | fbp-RA |
Protein status: | GH01546.pep: gold |
Preliminary Size: | 1057 |
Sequenced Size: | 1129 |
Gene | Date | Evidence |
---|---|---|
CG31692 | 2001-07-04 | Blastp of sequenced clone |
CG31692 | 2003-01-01 | Sim4 clustering to Release 3 |
fbp | 2008-04-29 | Release 5.5 accounting |
fbp | 2008-08-15 | Release 5.9 accounting |
fbp | 2008-12-18 | 5.12 accounting |
1129 bp (1129 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047506
> GH01546.complete CCGTCGACCGCGGTTCGTTGTTTGTTTGCCAGAGTTTGTCGATTTGTTCC AAAATGACCCAACAGAGGCCAGCTTTCGACTCCAATGCGATGACGCTGAC GCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGCGCCACTGGCGATC TCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAAGGCTACATCATCC GCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGATTCGCTGGCGACGT GAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTGCTCTCCAACGAGC TGTTCATCAACATGCTGAAGTCATCCTATACCACATGTCTAATGGTTTCC GAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGAAACAGGGCAAATA CATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAACATAGACTGCCTGG TGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAAAAGCGATGGTCCG CCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGCTGGTGGCCGCCGG CTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTGGGTCTGGGTTCGG GAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGAGTTCGTGCTGACC GATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATATACTCTATCAACGA GGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAACTACATTGCGGCCA AGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCGGTACGTGGGTTCC ATGGTCGCGGATGTGCATCGCACCATTAAATACGGCGGCATCTTTATCTA TCCGGCAACAAAGTCCGCTCCCAGCGGAAAACTTCGTCTGCTGTACGAGT GCGTGCCCATGGCCTATCTGATGATCCAGGCTGGAGGTCTGGCCAGCGAC GGAAAGATCAGCATTTTGGACATTGTGCCCAAGAAGATCCACGAGCGCAG TCCCATATTCCTAGGATCCAAGTCCGACGTGGAGGAGGCACTTAGCTACT TAAAGTGATTGTTGTGACTACAGTAACGTATCAATAAAGATCAATTATAT TTTTTACTAAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fbp-RA | 1297 | fbp-RA | 128..1241 | 1..1114 | 5570 | 100 | Plus |
fbp-RB | 1278 | fbp-RB | 155..1222 | 47..1114 | 5340 | 100 | Plus |
fbp.a | 1354 | fbp.a | 284..1349 | 49..1114 | 5330 | 100 | Plus |
fbp-RB | 1278 | fbp-RB | 37..84 | 1..48 | 240 | 100 | Plus |
fbp.a | 1354 | fbp.a | 22..69 | 1..48 | 240 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 19760109..19760830 | 1111..390 | 3580 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 19761009..19761353 | 393..49 | 1710 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 19762592..19762639 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19761584..19762308 | 1114..390 | 3625 | 100 | Minus |
2L | 23513712 | 2L | 19762487..19762831 | 393..49 | 1725 | 100 | Minus |
2L | 23513712 | 2L | 19764070..19764117 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19761584..19762308 | 1114..390 | 3625 | 100 | Minus |
2L | 23513712 | 2L | 19762487..19762831 | 393..49 | 1725 | 100 | Minus |
2L | 23513712 | 2L | 19764070..19764117 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 3384..3449 | 507..571 | 110 | 68.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19760109..19760827 | 393..1111 | 99 | <- | Minus |
chr2L | 19761010..19761353 | 49..392 | 99 | <- | Minus |
chr2L | 19762592..19762639 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RB | 15..1032 | 40..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RB | 15..1032 | 40..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RA | 1..1005 | 54..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RB | 15..1032 | 40..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RA | 1..1005 | 54..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RA | 18..1128 | 1..1111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RA | 18..1128 | 1..1111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RA | 20..1130 | 1..1111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RA | 18..1128 | 1..1111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fbp-RA | 20..1130 | 1..1111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19761587..19762305 | 393..1111 | 100 | <- | Minus |
2L | 19762488..19762831 | 49..392 | 100 | <- | Minus |
2L | 19764070..19764117 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19761587..19762305 | 393..1111 | 100 | <- | Minus |
2L | 19762488..19762831 | 49..392 | 100 | <- | Minus |
2L | 19764070..19764117 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19761587..19762305 | 393..1111 | 100 | <- | Minus |
2L | 19762488..19762831 | 49..392 | 100 | <- | Minus |
2L | 19764070..19764117 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19761587..19762305 | 393..1111 | 100 | <- | Minus |
arm_2L | 19762488..19762831 | 49..392 | 100 | <- | Minus |
arm_2L | 19764070..19764117 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19761587..19762305 | 393..1111 | 100 | <- | Minus |
2L | 19762488..19762831 | 49..392 | 100 | <- | Minus |
2L | 19764070..19764117 | 1..48 | 100 | Minus |
Translation from 2 to 1057
> GH01546.hyp VDRGSLFVCQSLSICSKMTQQRPAFDSNAMTLTRFVLQEQRKFKSATGDL SQLLNSIQTAIKATSSAVRKAGIAKLHGFAGDVNVQGEEVKKLDVLSNEL FINMLKSSYTTCLMVSEENENVIEVEVEKQGKYIVCFDPLDGSSNIDCLV SIGSIFAIYRKKSDGPPTVEDALQPGNQLVAAGYALYGSATAIVLGLGSG VNGFTYDPAIGEFVLTDPNMRVPEKGKIYSINEGYAADWEDGVFNYIAAK KDPAKGKPYGARYVGSMVADVHRTIKYGGIFIYPATKSAPSGKLRLLYEC VPMAYLMIQAGGLASDGKISILDIVPKKIHERSPIFLGSKSDVEEALSYL K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fbp-PE | 334 | CG31692-PE | 1..334 | 18..351 | 1702 | 100 | Plus |
fbp-PA | 334 | CG31692-PA | 1..334 | 18..351 | 1702 | 100 | Plus |
fbp-PD | 322 | CG31692-PD | 1..322 | 30..351 | 1640 | 100 | Plus |
fbp-PC | 322 | CG31692-PC | 1..322 | 30..351 | 1640 | 100 | Plus |
Translation from 53 to 1057
> GH01546.pep MTQQRPAFDSNAMTLTRFVLQEQRKFKSATGDLSQLLNSIQTAIKATSSA VRKAGIAKLHGFAGDVNVQGEEVKKLDVLSNELFINMLKSSYTTCLMVSE ENENVIEVEVEKQGKYIVCFDPLDGSSNIDCLVSIGSIFAIYRKKSDGPP TVEDALQPGNQLVAAGYALYGSATAIVLGLGSGVNGFTYDPAIGEFVLTD PNMRVPEKGKIYSINEGYAADWEDGVFNYIAAKKDPAKGKPYGARYVGSM VADVHRTIKYGGIFIYPATKSAPSGKLRLLYECVPMAYLMIQAGGLASDG KISILDIVPKKIHERSPIFLGSKSDVEEALSYLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15476-PA | 343 | GF15476-PA | 10..343 | 1..334 | 1611 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21609-PA | 343 | GG21609-PA | 10..343 | 1..334 | 1732 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13045-PA | 343 | GH13045-PA | 10..343 | 1..334 | 1565 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fbp-PF | 343 | CG31692-PF | 10..343 | 1..334 | 1702 | 100 | Plus |
fbp-PA | 334 | CG31692-PA | 1..334 | 1..334 | 1702 | 100 | Plus |
fbp-PD | 322 | CG31692-PD | 1..322 | 13..334 | 1640 | 100 | Plus |
fbp-PC | 322 | CG31692-PC | 1..322 | 13..334 | 1640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18191-PA | 343 | GI18191-PA | 10..343 | 1..334 | 1590 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25621-PA | 344 | GL25621-PA | 10..344 | 1..334 | 1646 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16400-PA | 344 | GA16400-PA | 10..344 | 1..334 | 1646 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16988-PA | 343 | GM16988-PA | 10..343 | 1..334 | 1746 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21735-PA | 342 | GD21735-PA | 11..337 | 2..328 | 1723 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14680-PA | 343 | GJ14680-PA | 10..343 | 1..334 | 1599 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15219-PA | 344 | GK15219-PA | 10..344 | 1..334 | 1590 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12630-PA | 343 | GE12630-PA | 10..343 | 1..334 | 1740 | 98.5 | Plus |