BDGP Sequence Production Resources |
Search the DGRC for GH01560
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 15 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1545-RB |
Protein status: | GH01560.pep: gold |
Preliminary Size: | 968 |
Sequenced Size: | 734 |
Gene | Date | Evidence |
---|---|---|
CG1545 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1545 | 2002-05-16 | Blastp of sequenced clone |
CG1545 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1545 | 2008-04-29 | Release 5.5 accounting |
CG1545 | 2008-08-15 | Release 5.9 accounting |
CG1545 | 2008-12-18 | 5.12 accounting |
734 bp (734 high quality bases) assembled on 2002-05-16
GenBank Submission: AY118721
> GH01560.complete GCAGTTAAAACCGCGCCGAGACAGCCACGTATCGCATTCGAGGCATCCGA AGGCGTCCAATAGCCACTAGATACATGGCAGGCTCAGGTTCCGAATCAAA TTTATCTACAAATTCTGGCCCAGAATTCGATTCTGATTTTGGCGGCGGCG GTTGTGTTTACGATTGTTGTGCAATGGCCAAATCGATAACAGAAACGAGA ACCACAAATTCTACGGCGGCAACCATAACTGCAATACACACTCGCAAAAG CACCACAACAATCGCATTTGTTCTGCTGTTAATCCTCTGCTGTTTATGTG ATTACAACCATGGAAGCTGGGCATCGCAATGCTGGAAAAAGCACAATTCC GGCTCGATCCAAACGCCAGATGGAGAATTTAAGCGACCCTTTGGCATACT CTGCACATATCGCTGCTTTCTCTGGTTTCCGCCAATTTATCCGTACTGTG AATTCATATTCGATCTGCGCTTATCGAGGCACTTCACATCCTTTCCGGAC TGCTACGAGATTCGCTGCAACGAGACCTTCTCCTTTTTCGGCAAGGAGCC CCATTACTGACCTCCACCACCTGGAGGGTCAGTTGCTCAGCGTGTGAGCA ACTGACATTCCACATCCCCTTCCTTTTTTTTTTTTTTGAGTACTATCTGT GACTAAGAATTGTATGCTTCAATAAATATGGGTTACTGCATAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10950544..10950859 | 316..1 | 1580 | 100 | Minus |
chrX | 22417052 | chrX | 10948809..10949065 | 691..437 | 1220 | 99.2 | Minus |
chrX | 22417052 | chrX | 10949630..10949750 | 436..316 | 605 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11059279..11059594 | 316..1 | 1580 | 100 | Minus |
X | 23542271 | X | 11057541..11057800 | 695..437 | 1250 | 99.6 | Minus |
X | 23542271 | X | 11058365..11058485 | 436..316 | 605 | 100 | Minus |
X | 23542271 | X | 10316236..10316287 | 731..680 | 245 | 98.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11067377..11067692 | 316..1 | 1580 | 100 | Minus |
X | 23527363 | X | 11065639..11065898 | 695..437 | 1260 | 99.6 | Minus |
X | 23527363 | X | 11066463..11066583 | 436..316 | 605 | 100 | Minus |
X | 23527363 | X | 10324334..10324385 | 731..680 | 245 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10948809..10949065 | 437..691 | 99 | <- | Minus |
chrX | 10949630..10949750 | 316..436 | 100 | <- | Minus |
chrX | 10950545..10950859 | 1..315 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 1..387 | 174..560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 1..387 | 174..560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 1..387 | 174..560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 1..387 | 174..560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 1..387 | 174..560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 26..717 | 1..691 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 26..717 | 1..691 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 26..717 | 1..691 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 26..717 | 1..691 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1545-RB | 26..717 | 1..691 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11057545..11057800 | 437..691 | 99 | <- | Minus |
X | 11058365..11058485 | 316..436 | 100 | <- | Minus |
X | 11059280..11059594 | 1..315 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11057545..11057800 | 437..691 | 99 | <- | Minus |
X | 11058365..11058485 | 316..436 | 100 | <- | Minus |
X | 11059280..11059594 | 1..315 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11057545..11057800 | 437..691 | 99 | <- | Minus |
X | 11058365..11058485 | 316..436 | 100 | <- | Minus |
X | 11059280..11059594 | 1..315 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10951578..10951833 | 437..691 | 99 | <- | Minus |
arm_X | 10952398..10952518 | 316..436 | 100 | <- | Minus |
arm_X | 10953313..10953627 | 1..315 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11065643..11065898 | 437..691 | 99 | <- | Minus |
X | 11066463..11066583 | 316..436 | 100 | <- | Minus |
X | 11067378..11067692 | 1..315 | 100 | Minus |
Translation from 74 to 559
> GH01560.pep MAGSGSESNLSTNSGPEFDSDFGGGGCVYDCCAMAKSITETRTTNSTAAT ITAIHTRKSTTTIAFVLLLILCCLCDYNHGSWASQCWKKHNSGSIQTPDG EFKRPFGILCTYRCFLWFPPIYPYCEFIFDLRLSRHFTSFPDCYEIRCNE TFSFFGKEPHY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20399-PA | 149 | GF20399-PA | 4..148 | 6..160 | 539 | 75 | Plus |
Dana\GF20398-PA | 142 | GF20398-PA | 66..135 | 84..148 | 140 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18885-PA | 84 | GG18885-PA | 5..84 | 82..161 | 441 | 100 | Plus |
Dere\GG18884-PA | 138 | GG18884-PA | 62..131 | 84..148 | 140 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17596-PA | 123 | GH17596-PA | 18..119 | 57..158 | 470 | 93.1 | Plus |
Dgri\GH17595-PA | 140 | GH17595-PA | 64..133 | 84..148 | 146 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1545-PB | 128 | CG1545-PB | 1..128 | 34..161 | 724 | 100 | Plus |
CG1537-PA | 135 | CG1537-PA | 59..128 | 84..148 | 148 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16462-PA | 86 | GI16462-PA | 7..86 | 82..161 | 429 | 96.2 | Plus |
Dmoj\GI16460-PA | 134 | GI16460-PA | 58..127 | 84..148 | 146 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18315-PA | 109 | GL18315-PA | 5..109 | 17..121 | 350 | 71.3 | Plus |
Dper\GL18314-PA | 133 | GL18314-PA | 57..126 | 84..148 | 142 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13738-PA | 150 | GA13738-PA | 5..148 | 17..160 | 543 | 76.9 | Plus |
Dpse\GA13678-PA | 133 | GA13678-PA | 57..126 | 84..148 | 142 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11268-PA | 161 | GM11268-PA | 1..161 | 1..161 | 854 | 99.4 | Plus |
Dsec\GM11267-PA | 135 | GM11267-PA | 59..128 | 84..148 | 140 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16004-PA | 41 | GD16004-PA | 1..41 | 121..161 | 220 | 100 | Plus |
Dsim\GD16003-PA | 135 | GD16003-PA | 59..128 | 84..148 | 140 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15939-PA | 173 | GJ15939-PA | 28..173 | 20..161 | 515 | 81.5 | Plus |
Dvir\GJ15938-PA | 141 | GJ15938-PA | 65..134 | 84..148 | 147 | 38.6 | Plus |
Translation from 74 to 559
> GH01560.hyp MAGSGSESNLSTNSGPEFDSDFGGGGCVYDCCAMAKSITETRTTNSTAAT ITAIHTRKSTTTIAFVLLLILCCLCDYNHGSWASQCWKKHNSGSIQTPDG EFKRPFGILCTYRCFLWFPPIYPYCEFIFDLRLSRHFTSFPDCYEIRCNE TFSFFGKEPHY*