BDGP Sequence Production Resources |
Search the DGRC for GH01592
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 15 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4847-RA |
Protein status: | GH01592.pep: gold |
Preliminary Size: | 1173 |
Sequenced Size: | 1317 |
Gene | Date | Evidence |
---|---|---|
CG4847 | 2001-01-01 | Release 2 assignment |
CG4847 | 2001-07-04 | Blastp of sequenced clone |
CG4847 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4847 | 2008-04-29 | Release 5.5 accounting |
CG4847 | 2008-08-15 | Release 5.9 accounting |
CG4847 | 2008-12-18 | 5.12 accounting |
1317 bp (1317 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047507
> GH01592.complete TCCAAGTCCATCGTCCACAAAGATCAGTATGAAGCTTCTGTTGGTTCTTC CACTTCTGGTGGCTGTGGTCTCTGGCCAGGGATTCGGAGGCGGTGGATTT GGAGGCGGATTTGGAGGTGGACTCGGAGGCGGATTTGGAGGTGGACTCGG AGGCTTGGGCAACAATCGAGTGGGTGGAGCTTTACAAAATGTGGCCGGCG CCGTTCAGAATGCCGTGGGCAACATTGCCAAGGCTGTGCCCAAGGTGCCG CTGCTCTCAAACGTCCAGGACTTTGGTGACTTCTTGAGCCAATCTGGAAA GACCTATCTCTCCGCCGCTGATCGCGCTCTTCATGAAGGTGCCTTCGCTT CCACCAAGAACCTGGTGGAAGCCGGAAACGCAGCCTTTGCCCAAGGAGTG CACACCTTCAAGCAGGCCGTGAACGCCTTCGCCGATCTGACCCACTCTGA GTTCCTTAGTCAATTGACCGGTCTGAAGAGAAGTCCGGAGGCTAAGGCTC GAGCTGCTGCCAGTTTGAAGTTGGTCAACCTGCCTGCGAAGCCCATCCCG GATGCCTTCGATTGGCGCGAGCATGGCGGTGTCACACCAGTCAAATTCCA GGGTACCTGTGGCTCCTGTTGGGCCTTTGCCACCACTGGTGCCATTGAGG GACACACCTTCCGCAAGACCGGCAGCCTGCCCAATCTCTCTGAGCAGAAT CTGGTCGACTGTGGTCCGGTGGAGGACTTTGGCCTGAATGGCTGCGATGG TGGCTTCCAGGAGGCCGCATTCTGTTTCATCGATGAGGTGCAAAAGGGTG TGTCCCAGGAGGGGGCCTATCCCTACATTGACAACAAGGGCACGTGCAAG TACGATGGCAGCAAGTCCGGAGCCACCCTCCAGGGATTCGCCGCTATTCC GCCCAAGGACGAGGAGCAGCTGAAGAAGGTGGTGGCCACTCTGGGACCAG TTGCCTGTTCGGTGAATGGTTTGGAGACTCTTAAGAACTACGCCGGTGGC ATCTATAACGACGATGAGTGCAACAAGGGCGAGCCGAACCACTCCATTCT GGTCGTCGGTTACGGATCGGAGAAAGGACAGGATTACTGGATCGTCAAGA ACTCCTGGGACGACACCTGGGGCGAAAAGGGCTACTTCCGCCTGCCTCGC GGCAAAAACTACTGCTTCATTGCTGAGGAGTGCTCCTATCCCGTGGTTTA AGCGGGGAATCCGAAATTTATGGCAAAATTTACTGTGCAGTTTGTGATGT GGACTTGGCGTTGGTTGCGTCCATTTCTTAAATAAAAGTCTTTTCTTAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13400120..13400921 | 496..1297 | 3920 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 13399520..13399785 | 21..286 | 1330 | 100 | Plus |
chr2R | 21145070 | chr2R | 13399845..13400055 | 286..496 | 1040 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17513050..17513853 | 496..1299 | 4020 | 100 | Plus |
2R | 25286936 | 2R | 17512450..17512715 | 21..286 | 1330 | 100 | Plus |
2R | 25286936 | 2R | 17512775..17512985 | 286..496 | 1055 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17514249..17515052 | 496..1299 | 4020 | 100 | Plus |
2R | 25260384 | 2R | 17513649..17513914 | 21..286 | 1330 | 100 | Plus |
2R | 25260384 | 2R | 17513974..17514184 | 286..496 | 1055 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 2908..3003 | 248..155 | 123 | 61.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13398593..13398614 | 1..22 | 100 | -> | Plus |
chr2R | 13399522..13399785 | 23..286 | 82 | -> | Plus |
chr2R | 13399846..13400054 | 287..495 | 99 | -> | Plus |
chr2R | 13400120..13400921 | 496..1297 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RD | 83..1263 | 21..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RD | 83..1263 | 21..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RD | 83..1263 | 21..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RD | 83..1263 | 21..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RD | 83..1263 | 21..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RA | 1..1297 | 1..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RA | 1..1297 | 1..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RA | 11..1307 | 1..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RA | 1..1297 | 1..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4847-RA | 11..1307 | 1..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17511523..17511544 | 1..22 | 100 | -> | Plus |
2R | 17512452..17512715 | 23..286 | 100 | -> | Plus |
2R | 17512776..17512984 | 287..495 | 100 | -> | Plus |
2R | 17513050..17513851 | 496..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17511523..17511544 | 1..22 | 100 | -> | Plus |
2R | 17512452..17512715 | 23..286 | 100 | -> | Plus |
2R | 17512776..17512984 | 287..495 | 100 | -> | Plus |
2R | 17513050..17513851 | 496..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17511523..17511544 | 1..22 | 100 | -> | Plus |
2R | 17512452..17512715 | 23..286 | 100 | -> | Plus |
2R | 17512776..17512984 | 287..495 | 100 | -> | Plus |
2R | 17513050..17513851 | 496..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13399028..13399049 | 1..22 | 100 | -> | Plus |
arm_2R | 13399957..13400220 | 23..286 | 100 | -> | Plus |
arm_2R | 13400281..13400489 | 287..495 | 100 | -> | Plus |
arm_2R | 13400555..13401356 | 496..1297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17513651..17513914 | 23..286 | 100 | -> | Plus |
2R | 17513975..17514183 | 287..495 | 100 | -> | Plus |
2R | 17514249..17515050 | 496..1297 | 100 | Plus | |
2R | 17512722..17512743 | 1..22 | 100 | -> | Plus |
Translation from 1 to 1200
> GH01592.hyp PSPSSTKISMKLLLVLPLLVAVVSGQGFGGGGFGGGFGGGLGGGFGGGLG GLGNNRVGGALQNVAGAVQNAVGNIAKAVPKVPLLSNVQDFGDFLSQSGK TYLSAADRALHEGAFASTKNLVEAGNAAFAQGVHTFKQAVNAFADLTHSE FLSQLTGLKRSPEAKARAAASLKLVNLPAKPIPDAFDWREHGGVTPVKFQ GTCGSCWAFATTGAIEGHTFRKTGSLPNLSEQNLVDCGPVEDFGLNGCDG GFQEAAFCFIDEVQKGVSQEGAYPYIDNKGTCKYDGSKSGATLQGFAAIP PKDEEQLKKVVATLGPVACSVNGLETLKNYAGGIYNDDECNKGEPNHSIL VVGYGSEKGQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4847-PD | 420 | CG4847-PD | 28..420 | 7..399 | 2090 | 99.7 | Plus |
CG4847-PE | 390 | CG4847-PE | 1..390 | 10..399 | 2081 | 100 | Plus |
CG4847-PC | 390 | CG4847-PC | 1..390 | 10..399 | 2081 | 100 | Plus |
CG4847-PA | 390 | CG4847-PA | 1..390 | 10..399 | 2081 | 100 | Plus |
CG6347-PA | 352 | CG6347-PA | 30..352 | 83..399 | 733 | 46.2 | Plus |
Translation from 28 to 1200
> GH01592.pep MKLLLVLPLLVAVVSGQGFGGGGFGGGFGGGLGGGFGGGLGGLGNNRVGG ALQNVAGAVQNAVGNIAKAVPKVPLLSNVQDFGDFLSQSGKTYLSAADRA LHEGAFASTKNLVEAGNAAFAQGVHTFKQAVNAFADLTHSEFLSQLTGLK RSPEAKARAAASLKLVNLPAKPIPDAFDWREHGGVTPVKFQGTCGSCWAF ATTGAIEGHTFRKTGSLPNLSEQNLVDCGPVEDFGLNGCDGGFQEAAFCF IDEVQKGVSQEGAYPYIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLKK VVATLGPVACSVNGLETLKNYAGGIYNDDECNKGEPNHSILVVGYGSEKG QDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13132-PA | 392 | GF13132-PA | 1..392 | 1..390 | 1213 | 64.9 | Plus |
Dana\GF13714-PA | 352 | GF13714-PA | 24..352 | 68..390 | 764 | 46 | Plus |
Dana\GF17600-PA | 333 | GF17600-PA | 15..333 | 66..390 | 634 | 43.2 | Plus |
Dana\GF13722-PA | 417 | GF13722-PA | 111..417 | 88..390 | 602 | 40 | Plus |
Dana\GF17358-PA | 329 | GF17358-PA | 27..329 | 81..390 | 503 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20691-PA | 378 | GG20691-PA | 33..378 | 45..390 | 1697 | 91.3 | Plus |
Dere\GG20405-PA | 352 | GG20405-PA | 24..352 | 68..390 | 737 | 44.8 | Plus |
Dere\GG20414-PA | 341 | GG20414-PA | 26..341 | 79..390 | 620 | 41.4 | Plus |
Dere\GG23942-PA | 338 | GG23942-PA | 35..338 | 81..390 | 501 | 34.5 | Plus |
Dere\GG11133-PA | 615 | GG11133-PA | 309..614 | 82..390 | 487 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21411-PA | 391 | GH21411-PA | 52..391 | 50..390 | 1162 | 63.2 | Plus |
Dgri\GH23906-PA | 358 | GH23906-PA | 19..358 | 50..390 | 1160 | 63.2 | Plus |
Dgri\GH21038-PA | 349 | GH21038-PA | 23..349 | 67..390 | 781 | 45.9 | Plus |
Dgri\GH22826-PA | 340 | GH22826-PA | 10..340 | 62..390 | 613 | 38.1 | Plus |
Dgri\GH20767-PA | 329 | GH20767-PA | 36..329 | 91..390 | 519 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4847-PE | 390 | CG4847-PE | 1..390 | 1..390 | 2081 | 100 | Plus |
CG4847-PD | 420 | CG4847-PD | 31..420 | 1..390 | 2081 | 100 | Plus |
CG4847-PC | 390 | CG4847-PC | 1..390 | 1..390 | 2081 | 100 | Plus |
CG4847-PA | 390 | CG4847-PA | 1..390 | 1..390 | 2081 | 100 | Plus |
CG6347-PA | 352 | CG6347-PA | 30..352 | 74..390 | 733 | 46.2 | Plus |
Cp1-PA | 341 | CG6692-PA | 26..341 | 79..390 | 621 | 41.7 | Plus |
Cp1-PC | 371 | CG6692-PC | 56..371 | 79..390 | 621 | 41.7 | Plus |
Cp1-PE | 338 | CG6692-PE | 35..338 | 91..390 | 617 | 43 | Plus |
Cp1-PD | 249 | CG6692-PD | 32..249 | 173..390 | 540 | 47.1 | Plus |
CG5367-PA | 338 | CG5367-PA | 35..338 | 81..390 | 482 | 32.7 | Plus |
CG12163-PB | 475 | CG12163-PB | 169..474 | 82..390 | 477 | 35.6 | Plus |
CG12163-PA | 614 | CG12163-PA | 308..613 | 82..390 | 477 | 35.6 | Plus |
CG11459-PB | 336 | CG11459-PB | 48..334 | 102..388 | 449 | 35.4 | Plus |
CG11459-PA | 336 | CG11459-PA | 48..334 | 102..388 | 449 | 35.4 | Plus |
26-29-p-PA | 549 | CG8947-PA | 245..546 | 82..387 | 405 | 33.4 | Plus |
Swim-PA | 431 | CG3074-PA | 157..422 | 139..390 | 287 | 30.9 | Plus |
Swim-PB | 431 | CG3074-PB | 157..422 | 139..390 | 287 | 30.9 | Plus |
CG6337-PB | 340 | CG6337-PB | 27..336 | 81..388 | 243 | 28 | Plus |
CG6337-PA | 340 | CG6337-PA | 27..336 | 81..388 | 243 | 28 | Plus |
CtsB1-PC | 340 | CG10992-PC | 87..334 | 173..386 | 228 | 28.1 | Plus |
CtsB1-PA | 340 | CG10992-PA | 87..334 | 173..386 | 228 | 28.1 | Plus |
CG2150-PA | 188 | CG2150-PA | 8..72 | 3..64 | 148 | 51.5 | Plus |
CG7294-PA | 127 | CG7294-PA | 1..72 | 1..57 | 146 | 52.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18587-PA | 366 | GI18587-PA | 29..366 | 52..390 | 1148 | 63.8 | Plus |
Dmoj\GI21205-PA | 339 | GI21205-PA | 13..339 | 66..390 | 655 | 40.7 | Plus |
Dmoj\GI18640-PA | 243 | GI18640-PA | 17..243 | 169..390 | 613 | 51.5 | Plus |
Dmoj\GI14103-PA | 334 | GI14103-PA | 29..334 | 79..390 | 518 | 33.8 | Plus |
Dmoj\GI20850-PA | 329 | GI20850-PA | 36..329 | 91..390 | 516 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11434-PA | 372 | GL11434-PA | 1..372 | 1..390 | 1315 | 66.2 | Plus |
Dper\GL17477-PA | 353 | GL17477-PA | 24..353 | 68..390 | 740 | 45.1 | Plus |
Dper\GL17172-PA | 341 | GL17172-PA | 11..341 | 62..390 | 615 | 38.4 | Plus |
Dper\GL19003-PA | 335 | GL19003-PA | 32..335 | 81..390 | 498 | 33.4 | Plus |
Dper\GL22196-PA | 627 | GL22196-PA | 321..626 | 82..390 | 457 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18475-PA | 372 | GA18475-PA | 1..372 | 1..390 | 1316 | 66.5 | Plus |
Dpse\GA24205-PA | 353 | GA24205-PA | 24..353 | 68..390 | 740 | 45.1 | Plus |
Dpse\GA25021-PA | 341 | GA25021-PA | 11..341 | 62..390 | 618 | 38.7 | Plus |
Dpse\GA25021-PB | 319 | GA25021-PB | 16..319 | 91..390 | 607 | 40.7 | Plus |
Dpse\GA23505-PA | 323 | GA23505-PA | 24..323 | 81..390 | 449 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21790-PA | 382 | GM21790-PA | 37..382 | 45..390 | 1758 | 95.1 | Plus |
Dsec\GM21493-PA | 352 | GM21493-PA | 24..352 | 68..390 | 747 | 45.7 | Plus |
Dsec\GM21500-PA | 341 | GM21500-PA | 26..341 | 79..390 | 629 | 42 | Plus |
Dsec\GM11735-PA | 338 | GM11735-PA | 35..338 | 81..390 | 480 | 32.9 | Plus |
Dsec\GM10654-PA | 615 | GM10654-PA | 309..614 | 82..390 | 476 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11280-PA | 382 | GD11280-PA | 37..382 | 45..390 | 1769 | 96 | Plus |
Dsim\GD10987-PA | 352 | GD10987-PA | 24..352 | 68..390 | 745 | 45.4 | Plus |
Dsim\GD10995-PA | 341 | GD10995-PA | 26..341 | 79..390 | 623 | 41.7 | Plus |
Dsim\GD22268-PA | 338 | GD22268-PA | 35..338 | 81..390 | 486 | 33.5 | Plus |
Dsim\GD19835-PA | 336 | GD19835-PA | 22..336 | 76..390 | 447 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20385-PA | 370 | GJ20385-PA | 37..370 | 56..390 | 1202 | 68.5 | Plus |
Dvir\GJ21653-PA | 342 | GJ21653-PA | 17..342 | 68..390 | 759 | 45.4 | Plus |
Dvir\GJ20806-PA | 339 | GJ20806-PA | 9..339 | 62..390 | 630 | 39 | Plus |
Dvir\GJ11310-PA | 328 | GJ11310-PA | 26..327 | 81..389 | 568 | 36.5 | Plus |
Dvir\GJ13554-PA | 331 | GJ13554-PA | 26..331 | 81..390 | 566 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22909-PA | 370 | GK22909-PA | 1..370 | 1..390 | 1272 | 61.4 | Plus |
Dwil\GK22908-PA | 381 | GK22908-PA | 1..381 | 1..390 | 1152 | 56.2 | Plus |
Dwil\GK17860-PA | 341 | GK17860-PA | 21..334 | 67..374 | 721 | 46.6 | Plus |
Dwil\GK19626-PA | 341 | GK19626-PA | 15..341 | 66..390 | 619 | 38.3 | Plus |
Dwil\GK14287-PA | 610 | GK14287-PA | 303..609 | 82..390 | 463 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11675-PA | 384 | GE11675-PA | 1..384 | 1..390 | 1752 | 90.5 | Plus |
Dyak\GE12565-PA | 353 | GE12565-PA | 24..353 | 68..390 | 745 | 45.5 | Plus |
Dyak\GE12574-PA | 341 | GE12574-PA | 26..341 | 79..390 | 619 | 41.4 | Plus |
Dyak\GE26053-PA | 338 | GE26053-PA | 35..338 | 81..390 | 487 | 34.2 | Plus |
Dyak\GE25302-PA | 615 | GE25302-PA | 309..614 | 82..390 | 477 | 36 | Plus |